PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_3733 FitnessBrowser__Dyella79:N515DRAFT_3733 (466 amino acids)

SeqID: N515DRAFT_3733 FitnessBrowser__Dyella79:N515DRAFT_3733
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Cytoplasmic                   [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ]
    SCL-BLAST-        Cytoplasmic                   [matched 32130160: Asparaginyl-tRNA synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            10.00
    Periplasmic            0.00
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            10.00

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>N515DRAFT_3733 FitnessBrowser__Dyella79:N515DRAFT_3733
MTVVSVKQALSGKLEAGSKATVRGWVRTRRDSKAGLSFVNITDGSCFAPIQAVVPATLAN
YETEVKHLTAGAGLIVSGTLVPSQGQGQAFELQAESVQVTGFVDDPETYPIQPKQHSMEF
LREVAHLRPRTNLFGAVTRVRHTMMTAIHRHLTEQGFFWINTPIITTSDAEGAGDMFRLS
TLDLANLPRTPDGKIDFRKDFFGREAFLTVSGQLNVEAYALAMSKVYTFGPTFRAENSNT
PRHLAEFWMVEPEIAFADLAADADCAEAFLKAIFKAVLDERADDMAFFAERVLPDAITRL
ENFIAQPFERIDYTEAVEILKNCGQKFEFPVAWGIDLQTEHERYLAEKHVGRPVVVMNYP
EQIKAFYMRLNDDEKTVAAMDVLAPGIGEIIGGSQREERLDYLDRRMAKFGLDAATYGWY
RDLRRYGTVPHAGFGLGFERLLVYVCGLANIRDAIPYPRAAGTAEF