PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on PP_1457 PP_1457 Phosphoribosylglycinamide formyltransferase 2 (393 amino acids)

SeqID: PP_1457 PP_1457 Phosphoribosylglycinamide formyltransferase 2
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        CytoplasmicMembrane           [matched 1171003: Probable phosphoribosylglycinamide formyltransferase 2]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    7.88
    Cytoplasmic            2.11
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    CytoplasmicMembrane    7.88

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>PP_1457 PP_1457 Phosphoribosylglycinamide formyltransferase 2
MTRIGTPLSPTATRVLLCGCGELGKEVVIELQRLGVEVIAVDRYANAPAMQVAHRSHVVN
MLDGVALRAVIEAEKPHYIVPEIEAIATATLVELENEGFTVVPTARATQLTMNREGIRRL
AAEELDLPTSPYHFADTYEDYAKAVADLGYPCVVKPVMSSSGKGQSLLRSDADLQKSWDY
AQEGGRAGKGRVIVEGFIDFEYEITLLTVRHVGGTTFLEPVGHRQEKGDYQESWQPQAMS
PKALAESQRVAKAVTDALGGRGLFGVELFVKGDQVWFSEVSPRPHDTGLVTLISQDLSQF
ALHARAILGLPIPVVRQFGPSASAVILPEGQSQQTSFANLGAALSEPDTAIRLFGKPEIN
GTRRMGVCLARDESVELARAKATRASQAVKVEF