PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Pf6N2E2_1798 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_1798 (475 amino acids)

SeqID: Pf6N2E2_1798 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_1798
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600456: argininosuccinate lyase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Pf6N2E2_1798 FitnessBrowser__pseudo6_N2E2:Pf6N2E2_1798
MAQTTDRLWGARFKSGPSAALAALSRCPERYFRLTPYDLAGSKAHARELQRAGLLSEQET
LTMLDALERIGADYRAGGIAPTLDDEDVHTFIERLLTERLGALGGKLRAGRSRNDQTAND
LRLFLRDHVRTLAVEVLGLQQALVDQAEQHIESICPGFTHLQQAQPIVFAHHLLAHAQSM
LRDVQRLVDWDVRTSLSPLGAAAMAGSAIARLPQQSAKEMGYSGVCENSIDAVASRDHVA
EFLFIASMLGINISRLAEEFCLWSSRQFRWVALDDAYATGSSIMPQKKNPDIAELARGKA
GRLIGNLTGLLSTLKSLPLSYNRDLSEDKNGVLDSVDTLLLVLPAMAGMVATMKVNVEEL
RRQAPLGFTLATEVADWLAVRGVPFKEAHEITGALVQACEKNDIELWEASPALLAEIDPR
LTPQVRESLTLEAAIAARSGWGGTAPQQVREQIGRLKTALAAQQQWTEDYQGFRL