Running PSORTb v3.0 on Pf6N2E2_273 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) (451 amino acids)
SeqID: Pf6N2E2_273 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Analysis Report: CMSVM- Unknown [No details] CytoSVM- Unknown [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Cytoplasmic, CytoplasmicMembrane[matched 2499313: NADH-quinone oxidoreductase subunit 1 (NADH dehydrogenase I chain 1) (NDH-1 subunit 1)] SCL-BLASTe- Unknown [No matches against database] Signal- Unknown [No signal peptide detected] Localization Scores: CytoplasmicMembrane 6.29 Cytoplasmic 3.70 Periplasmic 0.01 OuterMembrane 0.00 Extracellular 0.00 Final Prediction: Unknown (This protein may have multiple localization sites.) -------------------------------------------------------------------------------
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>Pf6N2E2_273 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) MTLTSFGPANRIQRSAETHPLTWRLRDDGEAVWLDEYQAKNGYAAARKAFADMAGDDIVQ TVKDSGLKGRGGAGFPTGVKWGLMPKDESINIRYLLCNADEMEPNTWKDRMLMEQLPHLL IEGMLISARALKTYRGYIFLRGEYTTAAKHLNRAVEEAKAAGLLGKNILGSGFDFELFVH TGAGRYICGEETALINSLEGRRANPRSKPPFPAAVGVWGKPTCVNNVETLCNVPAIIADG VDWYKSLARDGSEDMGTKLMGFSGKVKNPGLWELPFGVTGRELFEDYAGGMRDGYTLKCW QPGGAGTGFLLPEHLDAQMYAGGIAKVGTRMGTGLAMAVDNSVNMVSLLRNMEEFFSRES CGFCTPCRDGLPWSVKLLRALENGEGQAGDIETLLGLVGFLGPGKTFCAHAPGAVEPLGS AIKYFRPEFEAGIAPTSAVVPPLAKPIVVGA
Lawrence Berkeley National Laboratory