PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on PfGW456L13_2301 Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) (466 amino acids)

SeqID: PfGW456L13_2301 Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932236: Taurine--pyruvate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>PfGW456L13_2301 Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
MSVATNLIEEQPATSAETLYQFNESPLLARQSRQESNARSYPRRIPLALKRAKGIYVEDV
EGRTFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDRFVQDLFGLLP
PALAAEAKIQFCGPTGTDAVEAALKLVRTATGRSTVISFQGGYHGMSQGALSLMGSLGPK
KPLGALLGSGVQFMPYPYDYRCPFGLGGAQGVKANLSYLENLLNDPEAGVQLPAAVIVEV
VQGEGGVIPADLDWLRGVRRITEQAGVALIVDEIQSGFARTGKMFAFEHAGIIPDVVVMS
KAIGGSLPLAVVVYRDWLDTWLPGAHAGTFRGNQMAMAAGCAVMRYLVEHKVCEHAAAMG
ERLAEHLRILQRDFPQLGDIRGRGLMLGVELVDPTGALDAQGHPPAFARLAPLVQRECLK
RGLILELGGRHGAVVRFLPPLVITAAQIDRVAEIFGRALAAATANP