PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on PfGW456L13_2712 Alcohol dehydrogenase (EC 1.1.1.1) (386 amino acids)

SeqID: PfGW456L13_2712 Alcohol dehydrogenase (EC 1.1.1.1)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 462590: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>PfGW456L13_2712 Alcohol dehydrogenase (EC 1.1.1.1)
MNLTGNWSYPTSVRFGVGRIAELAEVCRSQGIQRPLLVTDSGLARAPITTAALDALRAAG
LGVALFCDLKPNPVEANLAGGLDAWRAGQHDGVIAFGGGSGLDMGKLIAFMSGQTRPVWD
FEDIGDYWTRADDSRIAPVIAVPTTAGTGSEVGRAAVIIDERTHTKRIIFHPKMMPRVVI
SDPALTVGMPAKITAGTGMDALSHCLEAYCAPGFHPLADGIAVEGMRLVANSLVKAVHTP
SDLEARAQMLAAAAMGATAFQKGLGGMHALSHPVGALYDTHHGMTNATFMPYVLHFNRSA
IEERITRLAAYLRLPSPGFDSFLAFVLKLRKDIGVPHTLVELGVDDRQADLIADMAIVDP
SAGGNPLPLTRDGVAKIFDAALHGRL

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory