PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on RR42_RS19805 RR42_RS19805 enoyl-CoA hydratase (258 amino acids)

SeqID: RR42_RS19805 RR42_RS19805 enoyl-CoA hydratase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596826: probable enoyl-CoA hydratase/isomerase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>RR42_RS19805 RR42_RS19805 enoyl-CoA hydratase
MTSPVLYHAAEGVATITLNRPDVLNALNSALLLELRAAVERAAQDEAVRAVVLSANGRGF
CAGADLAGRGTGLQDSGTLLRERYHPIILALRNMPKPVITSVNGVAAGAGMSLALAGDVV
LAGRSASFLQAFSKIGLVPDAGSTYFLPRYAGEMRARALAILAEKIDAEEAHRIGLVWKV
HEDEALPAETARLAAHLAQMPTFAYGLIKEALNASLQSDLPAQLEREATLQSRASKSEDV
KEGVAAFLEKRKPAFKGR

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory