Running PSORTb v3.0 on SMa1488 FitnessBrowser__Smeli:SMa1488 (747 amino acids)
SeqID: SMa1488 FitnessBrowser__Smeli:SMa1488 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Cytoplasmic [No details] ECSVM- Unknown [No details] ModHMM- Unknown [1 internal helix found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- CytoplasmicMembrane [matched 118508: Cytoplasmic membrane integral membrane protein] SCL-BLASTe- Unknown [No matches against database] Signal- Non-Cytoplasmic [Signal peptide detected] Localization Scores: CytoplasmicMembrane 9.99 Periplasmic 0.01 Extracellular 0.01 OuterMembrane 0.00 Cytoplasmic 0.00 Final Prediction: CytoplasmicMembrane 9.99 -------------------------------------------------------------------------------
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>SMa1488 FitnessBrowser__Smeli:SMa1488 MNDMTPVTSEITASEIGKPFKLPRRGFLGASLGALVLGVTLPAGRARAQAAAAAITPGTR ISAFLEILPNETVLFRSAFIEGGQGIFTAMAQIVGEELDVDPMQFVVEGAPPGPDYLLTG GGRFTGGSMSVRMSYDAMRKLGASARHMLIQAAAVRLRVPVSELSTEPGRVVHGASGRTL PYGEIADAAAGLPLPTNVVLRDRADFRWIGKPVARLDVRDKSTGKARYAIDLKVDRMLHA AVQHSPRLGGEPGALQNEADVRGMPGVHSIHSLPGTVAVVADSWWRARMAAEALQVTWTE PTRGTAHVMPADFSTEAHMAMLKATPGEGVAYETVGNAATALGDAARVVEATYDAPYLVH GQLEPPSALARWNDDGSLDLWVPNQAPEMFQAEAAKVAGIAPEKVTIHSPMLGGFFGRHF LYQTANPFPQAILLAKAVARPVKLIWSREEEFLRDTLRPMGAVRFRAGLDAEGLPVALEA VAVGEGPTGRWFGRQPDKVDSSSVEGIAGKVYAIPNRHIGQVHVDDPAIIGFWRSVGHSM NDFFYETFFDEMADAGQQDPYELRRRLLADSPRHRTLLEAVAELSGGWRRGPFIADDGTR RARGVAMASPFGSEVATIAEVSLRSGEVVVHDVWVAIDPGSIVNPAIIEAQVNSAVALGL SSALLEEVVYVDGMPQARNYDGYPILTPDRMPRVHVRIVESGAPMGGIGEPGLPGVPPAI ANAVSVLAGRRVRSLPLSKHDFKGVDG
Lawrence Berkeley National Laboratory