PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_010442659.1 NCBI__GCF_000192475.1:WP_010442659.1 (773 amino acids)

SeqID: WP_010442659.1 NCBI__GCF_000192475.1:WP_010442659.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2498933: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_010442659.1 NCBI__GCF_000192475.1:WP_010442659.1
MHGSTVLHTFTNTGYDGPGRRFPGFPNAFDARTHVLSPREAVKLSIKPGDLLSVEGAGSM
QPLDLAALAEGGQPMLAALGLSQTGLVEWDGFDSAQFSGWIAARDGDQRVPCYRFDQSSE
PVIIRASQTMTVWLIRPVGVAGLIEGSGAGNVTVLHKPAAKRDVQLPPLLGDTRDEFTIP
RGSAMAYELKAGEFVQIIDVEGQQCSDFMALRADGLDRGEEWMIDSTATRSMVRRAFPGP
GLLDKFFDRDMRPLLNVVQDTCGQHDTFGLACTARGYEERGFPGHLNCSDNMTNALVSYG
VKKRTAWPAINFFWSTWVDPASHHILTEESRSRPGDYVAMRALEDLVCTSTACPDDIDPI
NGWNPTDVHVRIYRPETPIRRAVAYREKEDALMSISQESAFHDRLAPLTQHFAPARDLWT
PVSYPAHGTLGEYWACREAVTVQDMSGLRKFDIVGPDAEALLQLATTRNVAKLPVWRGSY
TLMCDESGSVIDDGTLFRLAPEIFRWCCGSEESGRVLQELADSRGLQVRVHALRGTMPNL
AIQGPKSRDLLRKIAFTQPHVPSLDHLKWFGVTVARLNDREGAPFMLSRSGYTGELGYEV
FCSKSDAVAIWDAVMAAGEEFGITPMGSAALDIIRIEAGLAAANAEFAPGVDAFEAGLGF
AVDLTKSDFTGKSALQRNARDPRRVLKGLLIGCDDVPAHGAPVYAGERQVGVVTSAIRSP
MLEHAIAMARLSVEQVENGIQLEIGQLDGRMKRLCATVSDIPFIDPQRKRARA