PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_010933078.1 NCBI__GCF_000006985.1:WP_010933078.1 (714 amino acids)

SeqID: WP_010933078.1 NCBI__GCF_000006985.1:WP_010933078.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Extracellular          0.26
    Periplasmic            0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_010933078.1 NCBI__GCF_000006985.1:WP_010933078.1
MSNESKKPVASYYGALTFGTEAMRAKLPKEVFKALQDTIKAGKKLPADIAGVVAHGMKEW
AMEHGATHYTHWFQPMTGTTAEKHDAFLTTQMDGTVIERFSGEQLIQGEPDASSFPSGGM
RSTFEARGYTAWDPSSPAFLMKGGKGMTLCIPTVFISYHGEALDEKTPLLRSMDAVSKAA
IRLLDTIGITGVTKVNTYAGPEQEYFLIDKKFYAQRPDLIMTGRTLLGALPPKGQQLEDH
YFGSIPDRVLEFMQEVEEELFLLGIPAKTRHNEVAPHQFEIAPIFEQVNLASDHNLLVME
VMRKVADKKGFALLLFEKPFAGINGSGKHNNWSIGIDGGMNLLDPGDTPESNISFLVFLV
AVLKGVLKRSAILRASVASIGNDHRLGANEAPPAVITVFLGDLLEKVLDAIESGKVDLKT
EKQILDLGLSHVPVLNKDYTDRNRTSPFAFTGNKFEFRAVGSSQPISVPNMVLNTIMAEA
LDDLNAEILAKIEGGMAKEDAILAAVRDGIIATKAVRYPGDNYSEDLQRAAAERGLPNMK
NTPESVRAWTDKDTVSMFVKYGVLTAEEIESRYNVRIERYVKGIDIEARTLLLMIKTMVI
PDASEYQGDLASSFNNLAAAAESIGLSDAALQSQAGLLKTLAEDLSKLIDLTAILEETIE
EMEEQESELDKADFCSARLLPCMNAIREVADKIEVQVDRSRWQLPTYSEMLFEH