PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_011382757.1 AMB_RS01570 protein meaA (665 amino acids)

SeqID: WP_011382757.1 AMB_RS01570 protein meaA
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_011382757.1 AMB_RS01570 protein meaA
MTDKTAREAAAPSREKPWLFRTYSGHSSAAESNKLYRTNLTKGQTGLSIAFDLPTQTGYD
SDHVLAKGEVGKVGVPVCHLGDMMTLFEGIPLEKMNTSMTINAPAAWLLSLYIAAAERQG
ANRSVLNGTTQNDVIKEYLSRGTYIFAPQPSLKLTGDVIAFTYREVPKWNPMNVCSYHLQ
EAGATPEQELAYALATAVAVLDTVRPTVPAADFEQVVSRISFFVNAGIRFVTELCKMRAF
TELWDEICVGRYGVKDEKARRFRYGVQVNSLGLTEQQPENNVYRIVMEMLAVVLSKNARA
RAVQLPAWNEALGLPRPWDQQWSLRLQQIMAYETDLLEFGDIFDGSHEITRKVEALKEGA
REELARIDAMGGAVSAVESSYMKQKLVESNARRIGAIETGEQIVVGVNKWTETEPSPLTT
GEGSIMTVDPKAEAEQIERLKAFRAARDAKAVDKALAELRSAANEGRNVMEPSIAAAHAG
VTTGEWAQCLRDVFGEYRAPTGVARAAAEVKGEKMGAVRAKVEAVSAKLGRRVKILVGKP
GLDGHSNGAEQIAVRARDAGMEVVYEGIRLTPAQIVNAALEEGVHVVGLSILSGSHVPLV
TEVLERMKAAGLSDIPVVAGGIIPPEDEKVLLAAGCARIYTPKDYDITAIMGDIVALLDA
SPKAA