PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_011383284.1 AMB_RS04295 acetyl-CoA C-acetyltransferase (390 amino acids)

SeqID: WP_011383284.1 AMB_RS04295 acetyl-CoA C-acetyltransferase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1729941: Acetyl-CoA acetyltransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_011383284.1 AMB_RS04295 acetyl-CoA C-acetyltransferase
MTDIVIAAATRTPVGSFNGSLAGLQAAQLGEIVIREALKRAGVEAEAVDEVLLGHILTAG
CGQNTARQAAIKAGVPNTATAMAINQLCGSGLRAVALGFQAIKLGDANIIVAGGQESMSN
AQHAIYMRGGVKMGDASLVDTMIKDGLTDAFSPIHMGITAENLAEKFQITREEQDAFALG
SQNKAEAASKAGRFKDQIVPVTITVKREEKLFDTDEFIRMGCTLDQIAKPKPAFKKDGTV
TAANASGINDGGAALVLMTAKEADKRGIKPLARIAGWATAGTDPNTMGYGPVPATQKLLA
KLGWKHEDLDLIEANEAFAAQAIAVNKGMGWDTSKVNVNGGAIAIGHPIGASGARILVDL
LYEMGRRDAKKGLATLCIGGGMGIALCVER