PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_011868649.1 NCBI__GCF_000016125.1:WP_011868649.1 (537 amino acids)

SeqID: WP_011868649.1 NCBI__GCF_000016125.1:WP_011868649.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Cytoplasmic                   [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ]
    SCL-BLAST-        Cytoplasmic                   [matched 6686327: Phenylalanyl-tRNA synthetase alpha chain]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            10.00
    Periplasmic            0.00
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            10.00

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_011868649.1 NCBI__GCF_000016125.1:WP_011868649.1
MFKREEIIEMANKDFEKAWIETKDLIKAKKVNESYPRIKPAFGKTHPVNDTIENLRQAYL
RMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEKISQIEKLGIK
VSEHKESLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILEEVFPEFKDLTAVSSK
LTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEG
VDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFGV
YSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLSDRAVASMVKLD
KVPVMDEIYDLTKELIDSCVKNKDLKSPCELTIEKTFSFGKTKKNVKINIFEKEEGKNLL
GPSILNEIYVYDGNVIGIPESFDGVKEEFKDFLEKGKAEGVPTGIRYIDALCFKITSKLE
EAFVSNTTEFKVKVPIVRSLSDINLKIDDIALKQIMSKTKVIDVRGPVFLNVEVKIE