PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_012410949.1 NCBI__GCF_000020025.1:WP_012410949.1 (547 amino acids)

SeqID: WP_012410949.1 NCBI__GCF_000020025.1:WP_012410949.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Periplasmic                   [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599890: acetolactate synthase large subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Periplasmic            5.96
    Cytoplasmic            4.03
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_012410949.1 NCBI__GCF_000020025.1:WP_012410949.1
MNTAELLVQCLENEGVQYIFGLPGEENLHVLEALKHSSIKFITTRHEQGAAFMADVYGRL
TGKAGVCLSTLGPGATNLMTGVADANLDGAPLVAITGQVGTDRMHIESHQYLDLVAMFAP
VTKWNKQIVRPSITPEVVRKAFKRSQSEKPGAVHIDLPENIAAMPVEGKPLRKDNSEKTY
ASFASIRAAAAAICQAVNPLILVGNGAIRAQASDAVTQFATLLNIPVANTFMGKGVIPYT
HQLALWSVGLQQRDFITCGFDNTDLVIAIGYDLIEFSPKKWNRNGEIPIVHIGVSPAEID
SSYIPNAEVVGDISDSLYEILKLADRQGKPDPFAISLRSDIRADYEQYAHDDGFPIKPQK
LIYDLRQVMGPDDIVISDVGAHKMWMARHYHCHSPNTCIISNGFAAMGIAIPGALAAKLV
HPKRKVVAVTGDGGFMMNSQELETALRVGTPFVTIIFNDGGYGLIEWKQENHFGKGNSSF
VHFSNPDFVKYAESMGLKGYRVESALDLIPTLKEALAQDVPAVIDCPVDYRENHRFSQKA
GELSCAV