PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_012465333.1 NCBI__GCF_000020465.1:WP_012465333.1 (502 amino acids)

SeqID: WP_012465333.1 NCBI__GCF_000020465.1:WP_012465333.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 115305783: Glutamyl-tRNA synthetase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_012465333.1 NCBI__GCF_000020465.1:WP_012465333.1
MVAQRVRTRFAPSPTGYLHVGGLRTALYNYLFAKKMKGDFIIRIEDTDQSRKVEDAQQNL
IKTLEWAGIVADESPVHGGSFGPYVQSERLHIYREYCDRLLEDKHAYYCFSTSEELEENR
QLQLKQGLQPKYNRKWLPEEMGGAMPSSNIRKKMAEGSPYVVRMKVPDYISVWFEDMIRG
PVEFDSSTIDDQVLMKSDGFPTYHFASVIDDHLMEFTHIIRGEEWLPSMPKHLLLYEFFG
WEPPKFAHLPLLLNPDRSKLSKRQGDVAVEDYIRKGYSCDAIVNFVAMLGWNEGEGTEQE
VYALQELIDKFSLERVGKAGAVFNVEKLNWLEKQYIKHRPAADIINTIRPVLASELAKRE
TLLSVDVITGDHYLEQVIELMRERVGFEHEFVTFSSYFFFEPESYEEEAVKKRWIPETND
LLREFTAELEVLEPFTAETIESALKAFVAPKGLKAAVLIHPLRILASGVSFGPSLYHMLE
VLGREAVLRRITKGIEQISVAE