PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_013009467.1 NCBI__GCF_000025725.1:WP_013009467.1 (374 amino acids)

SeqID: WP_013009467.1 NCBI__GCF_000025725.1:WP_013009467.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599916: probable aminotransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_013009467.1 NCBI__GCF_000025725.1:WP_013009467.1
MKRTENLTPFIVMDILQRANEIGDCIHFEVGQPDMAPSGGVLDGMREALDDGQFPYTPAK
GIMPLREKISDFYKQYYRVQVSPERVMLTVGTSGAFLIAYSILVDIGEKLAFTDPGYPCY
KNYSYVLGIDPVMIPVGAETNYQMTAGMLAEHENVKAVQISSPCNPTGNLYGKENLLGLI
EYCKSKDIGFISDEIYHGLVYSGVKEHTALEFSDDAIVINGFSKYFCMPGARLGWMILPE
KLVRPAEVVMQNLFISAPTMSQIGCVHAFDYKFLEDYKAEYEKRRDFLYNELKSIFKIDV
VPEGAFYIWADISEYSDDCYNFALELLENARIAVTPGVDFGRNNTGKYIRFAYTRNIEHM
AEGIRRLKEYLKQR