PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_015927737.1 NCBI__GCF_000022085.1:WP_015927737.1 (386 amino acids)

SeqID: WP_015927737.1 NCBI__GCF_000022085.1:WP_015927737.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 54041555: Cystathionine gamma-synthase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_015927737.1 NCBI__GCF_000022085.1:WP_015927737.1
MSRETPPAWSKRSLAAQAMGHIDPLTKAVVPPIHLASTYIRDPDNQYSSGYCYGRPDNAT
VREAEAVLAMLEEAPAGALLFGSGMAAATAVFGALDPGDHVVAPTVMYWALRRWLGQEAT
RWGLKVDFVATDDLNALRAAVIPGKTKLVWLETPANPLWTITDIAAAAEIAHAAGARLAV
DSTAASPVVTRPLALGADVVMHSATKVLNGHSDVIAGVLAGARIDAFWARIQSVRSSQGA
ILGPFEAYLLLRGLRTLHLRIAAQMAGAAALAERFAAHPYVLAVLYPGLPEHPGHAVAAR
QMEGGFGTMLSIRVKGGEAAAIGTAARVALWKRATSLGGVESLIEHRASVEGPGTPCPPD
LLRLSTGIEDPDDLFADLDAALRGAA