PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_019622309.1 NCBI__GCF_000381785.1:WP_019622309.1 (931 amino acids)

SeqID: WP_019622309.1 NCBI__GCF_000381785.1:WP_019622309.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596984: aconitate hydratase 2[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_019622309.1 NCBI__GCF_000381785.1:WP_019622309.1
MSYYSDYLEEIEVRKKDLGLNPKPIDSAELLSEIIAQIKDVGNEHREASLNFFIYNILPG
TTPAAGVKATFLKDIALGKETVAEISAEFALEQLSHMKGGPSVEALLDIALSDDAQAAAA
AEVLKSQVFLYDADSARLADAFKAGNAIAKDILESYSKAEFFTKLSDIPETIKVITYIAG
EGDISTDLLSPGNQSHSRADRELHGKCMISPEAQQEIAEMGKQNPDAKVMLIAEKGTMGV
GSSRMSGVNNVALWAGEKTSPYIPFINNNPVVAGTNGIAPIFLTTVGVTGGIGLDLKNWV
KKTDANGEVVRDANGDPVLEEAYSVATGTVLTIDTKAKKLYNGDQELVDIADAFTPQKVE
FMKAGGSYAVTFGKKLQTFAAETLGVEAPAVYAQSKEISHEGQGLTAVEKIFNRNAVGVT
SKTPLHTGSDVRVKVNIVGSQDTTGPMTCQELEAMAASTISTSVDGAFQSGCHTASVWDN
KAKANTPKLMAFMNAFGAITARDPKHVYHSMTDVIHKVLNDITVDDRAIIIGGDSHTRMS
KGVAFGADSGTVAIALATGESAMPIPESVKVTFKGSMKPHMDFRDIVHATQAQMLKKFGG
ENVFQGRVIEVQIGTLLADQAFTFTDWTAEMKAKASICISTDDTLIQSLELAKSRIQIMI
NKGMENEAGMLQGLIDLADKRIAEVKSGEAPALAPDDNAKYYAELVVDLDVIEEPMIADP
DVNNEDVSKRYTHDVIRPASYYDGRKVDLGFVGSCMVHKGDMQIIAAMLRNLEKKGPITF
KAPLVVAPPTYNIVDELKAEGDWELLEKFAGFEFSDENPKEAARTKYENILYLERPGCNL
CMGNQEKAEAGDTVLATSTRLFQGRVVEDTAEKKGESLLGSTPMVVLSCVLGRFPTLEEY
KEAVEGIDLTTFAPPSEDLSVASTAIPAARI