PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_026596328.1 NCBI__GCF_000421465.1:WP_026596328.1 (1272 amino acids)

SeqID: WP_026596328.1 NCBI__GCF_000421465.1:WP_026596328.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597040: methionine synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_026596328.1 NCBI__GCF_000421465.1:WP_026596328.1
MHTNPSFESSARIKRLLAERILILDSAMGTMIQNRRLSEADYRGQRFRDWPSDLQGNNDL
LSLTQPRFIEEIHRENLDAGADIIETNTFNANRISLADYGMEDLAGEINREAAAIARRAA
DAATARTPDKPRLVTGVLGPTNRTASISPDVNDPGYRNITFEQLVAAYTEAVDGLVAGGA
DLLLIETIFDTLNAKAAIFAVKQYFERHGGQLPIMISGTITDASGRTLSGQTAEAFWNSL
RHARPISFGFNCALGPKELRQYIEEIAGYVDTHVSAHPNAGLPNEFGEYDETPEDMAVHI
REWARSGFLNIVGGCCGTTPEHIRAIAEAVEGVAPRRIPKAGHACRLAGLEPLNIVSPSH
PSPASGGGEITKTPSPANGGGEIAMIPSPASGGGAGWGFINIGERTNVTGSARFRRLIRE
DDYDTALEVARQQVENGAQLIDVNMDEGMLDSEAAMVRFLNLAAGEPDIARVPVMIDSSK
WAVIEAGLQCIQGKGVINSISLKEGEAAFLEHARLARRYGAAVVVMAFDETGQADSKQRK
VEICTRAYKLLREKLDFPPEEIIFDPNIFAVATGIPEHHRYGLDYLEAVAEIKRTLPHAL
TSGGVSNVSFSFRGNNYVREAIHAVFLYHAIKEGLDMGIVNAGQLGIYEEVPGDLRDAIE
DVLLCRRENADEYLLEVAEKYRGEGAAQAKEDLEWRTWPVEKRLEHALVKGITDYIDEDT
EEARQDLGNPLRVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKKAVAYLMPYLDAE
RQAGETAGRILMATVKGDVHDIGKNIVGVVLQCNGFEVVDLGVMVPADQILQTAREKKVD
IIGLSGLITPSLDEMVHVAKEMKRQGFEIPLLIGGATTSRVHTAVKIAPHYSKPVVYVSD
ASRAVGVAGNLLSKDLRTAYVESLAQEYEEVRRRHAMKQDRTRLLSIEAARNNRYRDTWA
DYEPPPPIEAGLQVFDDYPLDELTRYIDWSPFFQAWELAGSYPKILEDEVVGEEARRLFA
DARQMLEQLVAEKWLEARGVIGLFPAASRGDDIVIYTDESRREVRTVLHHLRQQHQKPQG
QPNYCLADYVAPEAADRADWIGAFAVTAGIGIEPHLERFEKDHDDYRAIMLKALADRLAE
AFAEHLHQRVRREFWGYAADENWANADLIAEKYRGIRPAPGYPACPDHTEKHTLFDLISP
EENAGIELTESFAMYPAAAVSGWYFSHPRASYFNVGKIGRDQVEDYARRKGVSTEQVEKW
LAPNLAYTPEND