PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_034273644.1 NCBI__GCF_000504245.1:WP_034273644.1 (428 amino acids)

SeqID: WP_034273644.1 NCBI__GCF_000504245.1:WP_034273644.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61217911: Isocitrate lyase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_034273644.1 NCBI__GCF_000504245.1:WP_034273644.1
MTDTTKSREQAAAELAKEWETNPRWKGIDRSYTAEDVVKLRGSVIEENTLARRGAEKLWD
LLHTEDYVHALGALTGGQAVQQVRAGLKAIYLSGWQVAADANLAGQTYPDQSLYPANSVP
AVVRRINNALGRADQINYAEGNTDIDWYAPIVADAEAGFGGPLNAFELMKGMIAAGAAGV
HWEDQLASEKKCGHLGGKVLVPTKQHVRTLNAARLASDVSDVPSIVIARTDAEAATLMTS
DVDERDEKFLTGERTSEGFYKVRNGIEPCIERAKAYAPYSDLIWMETGTPDLEVARQFAE
AVKAEFPDQMLAYNCSPSFNWRKNLDDATIAKFQRELGHMGYKFQFITLAGFHALNYSMF
DLAYGYAREGMTAYVDLQDREFASEERGFTAVKHQREAGTGWFDLVSTAINPESSTTALT
GSTEEAQF