PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_047215054.1 NCBI__GCF_001931675.1:WP_047215054.1 (575 amino acids)

SeqID: WP_047215054.1 NCBI__GCF_001931675.1:WP_047215054.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [2 internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Periplasmic                   [matched 11140879: Periplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Periplasmic            9.76
    Extracellular          0.11
    CytoplasmicMembrane    0.06
    OuterMembrane          0.06
    Cytoplasmic            0.00
  Final Prediction:
    Periplasmic            9.76

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_047215054.1 NCBI__GCF_001931675.1:WP_047215054.1
MNRFISIINPKWALAGVLLASGLAIGAASAQTADYPAVTYDRLTSAQADPGWLTYYRSYT
GQSNSPLKQINTATAKDLQQVWSYKFPAELQQGFEATPIVNGNYMFVTTPKDHVYAFDAK
TGKELWTYDPKLTSLSFKTACCDVVNRGVALYGKNVYVAMLSGQVVALDAQSGKVVWEKQ
LFEPGIGYAFTLAPLALKDSIIVGSSGGEYGARGFIAALNPANGEIQWKRWTVPAPNEKG
GNTWPNGMYQHAGSPAWLTGTYDVKTNTLFWGVGNPGPWLADMRPGKNLYSDSLLALDPA
NGDLKWHFQYTSHDTWDYDGVNTPVLANITYKGKHYEAIIHADRNGYIHAIDRTNGKLIY
AKPFVKATSVTGYTAAGVPIQNQKHYPKVGTTIETCPSFLGGKNWWSVSYDPTTHLAFVP
SLHACMTMSGKAVTYMQGLPYLGEGFEIRPEPGSKGYGELQAIDVNTGKKVWSHWSKLPW
NGGVASTAGGLVFSGSLNGHLYAFDQKNGKVLWESPQLASGVIAQPSVFEVDGTEYVAVL
AGYGGANPIWGGPMAKIAEHVPRGGTLYVFALKKG