PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_057507948.1 NCBI__GCF_001431535.1:WP_057507948.1 (894 amino acids)

SeqID: WP_057507948.1 NCBI__GCF_001431535.1:WP_057507948.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597040: methionine synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_057507948.1 NCBI__GCF_001431535.1:WP_057507948.1
MSTAPHTRLSGLEPLVITPDLLFINIGERTNVTGSAQFRKLVKEERYEEAVDVARQQVAS
GAQILDVNMDEGLIDSEAAMTRYLNLIMSEPDIARIPVMVDSSKWSVIEAGLKCLQGKSV
VNSISLKEGEDLFREHARKVLRYGAAAVVMAFDEAGQADTCARKVEICTRAYRILVDEIG
FPPQDIIFDPNIFAVATGIEEHDNYAVDFIEATRIIKRTLPHCHVSGGVSNVSFSFRGNE
TVRQAIHSVFLYHAIAAGMDMGIVNAGAMPIYDDLDAELRERVEDVILNRRADGTERLLE
IAERYKGSKGAARVEDLAWREKPVTDRLAHALVHGLDAWVEQDTEEARQASTRPLDVIEG
PLMNGMNVVGDLFGAGKMFLPQVVKSARVMKKAVAYLLPYIEAEKLRSGDTARSNGKIIM
ATVKGDVHDIGKNIVGVVLACNNFEVIDLGVMVPAQKILDAARAENADIIGLSGLITPSL
EEMSHVAREMQRQGFELPLMIGGATTSRAHTALKIDPHYKAPTVWVKDASRAVGVAQSLI
SHDLRAAFVAANEADYADIRLRHRNRGDAKRLVSLAHARGQRFDGGWADYVPPAPNQPGL
HVFDDYPLAELVDYIDWTPFFQAWELAGKYPAILTDEIVGSQASELYRDARQMLDRIVKE
RWLQARAVFGLWPANSVGDDVRVQHPDGEATLHFLRQQVDKPAERPDFCLADFIAPADSG
RQDWIGAFAVTAGIGIDAHVARFEAAHDDYNAILLKALADRFAEALAERLHQRVRKEFWG
HANDETLDNDALIAEKYSGIRPAPGYPACPEHSEKDTLFRLLDAQGNAGMQLTESFAMLP
TAAVSGYYFSHPQSQYFVVGRVSREQVTDYAKRKGVDRVQAERWLASNLDYDPE