PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_057508963.1 NCBI__GCF_001431535.1:WP_057508963.1 (1229 amino acids)

SeqID: WP_057508963.1 NCBI__GCF_001431535.1:WP_057508963.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [2 internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Extracellular          2.00
    CytoplasmicMembrane    2.00
    Cytoplasmic            2.00
    OuterMembrane          2.00
    Periplasmic            2.00
  Final Prediction:
    Unknown

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_057508963.1 NCBI__GCF_001431535.1:WP_057508963.1
MTSTAQLTSPDSADQLDRDYTLDHKYARETGRIYLSGVQALVRLPLMQRLRDAAAGIDSA
GFISGYRGSPLGGFDLELWRARQHLEAARVKFTPGLNEDLGATMVWGTQQTNLFPGANVQ
GVFGMWYGKGPGVDRCGDVFKHANAAGTSRLGGVLALAADDHACRSSTLPHGSEDEFVSA
MMPVLNPAGVQDILDMGVLGWAMSRYTGRWIGFKTIAETVESSASVDVDPLARRIVLPDD
FEMPAGGLNIRWPDPPLDQEMRLHRYAVTAAQAFARANGIDRTVLDSPRARLGIVTTGKS
YLDVLQALEYLGLDETACADIGIRVYKVGMTWPLEPQGIARFAQGLEDIIVVEEKRAFIE
RQMKEQFFNWPASWGPRPSIVGKYDEEGEWILPSTGELTPATIAGVIGRRIQKFFNNESI
EQRLQWMQEKEAELALPRANFPRVPHYCSGCPHNTSTTVPEGSRALGGIGCHYMVTWMDR
STDTFTHMGGEGVTWAGQAAFTDTPHVFQNLGDGTYFHSGSLAIRQSVAAGVNITYKILY
NDAVAMTGGQPVDGPLSVPDIARQMRAEGIQTIVVLSDNIEKWTRQRDQFPDGVAFHDRS
ALDAVQKRLREVKGVSILIYEQTCATEKRRRRKRGKLEDPAKRVVINSLVCEGCGDCGKK
SFCVSVLPKETEFGRKRDIDQSNCNKDYSCTTGFCPSFVTVHGGKPRKGSKRDASTLLDN
LPAPPVRTALEQPWNILITGVGGTGVVTIGALLGMAGHLEGKGSSVLDQTGLAQKGGAVT
THIRIARTPADIHAVRIAAGEADLVLGCDMVVVNDYWALSKVRAGRTQVVLNTYEAMPGS
FTTRPDMQFPAADIVAGIRVALGGESPLLLDATQLATALLGDAIASNLFILGYAWQQGLV
PLSFDALMRAIELNGAAVAMNQQAFAWGRLAAVDPQAVQQAAGLVRNGHTSAETTPGPLH
ALPPGEWESTEWGATAAPRNSSDERELRGLPGNAGDDVAFLPLDDARLSRSLDEMITRRA
AFLVDYQDQAYADRYRSLVDRVRRGEQDTLGGSTALTETVARYLFKLMAYKDEYEVARLY
TSGDFQRRLQQQFEGEYQLRFHLAPPLFAKKDAQGRLIKKEYGPWMLKAFGVLAKLKFLR
GGRLDPFGRTAERVGERQLITDYEATVQLLLDGLDDHRLALAVEIASIPEHIRGYGHVKE
AHLEKAKAREATLLAQWRNPRALHIVQVA