PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_066328198.1 NCBI__GCF_900100165.1:WP_066328198.1 (812 amino acids)

SeqID: WP_066328198.1 NCBI__GCF_900100165.1:WP_066328198.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Extracellular          2.50
    CytoplasmicMembrane    2.50
    Periplasmic            2.50
    OuterMembrane          2.50
    Cytoplasmic            0.00
  Final Prediction:
    Unknown

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_066328198.1 NCBI__GCF_900100165.1:WP_066328198.1
MVKGHKSVLQKIGTAAVLLFLVACASTKKESRIVADFNPDWNFKLGDYPTAIQADFNAND
WRALDLPHDWSIEGTFDKDSKTKQAQGFLPAGKGWYRKTFTLPENLANKSISVEFDGVFK
NSEVFINGHSLGMRPNGYISFAYELTPYLHFGTQKNIIAVKVDNDAQPNSRWYTGSGIYR
NVRLVASEKLHVAQWGTYVTTRGITKEKAIVDIDVDVKNGLGINKLFKLVSTILDKNNVE
VAKAISDGNIPANSILQVKQNTKIENPILWNTENPYLYKIVTKVYDGSTVVDTYETPLGV
RYFNFDAEKGFSLNGKPTKILGVCLHHDNGALGAVENIHAIRRKLTLLKEMGTNAIRMSH
NPHSLEMMKLCDEMGFIVQDEFTDVWKKKKVTNDYHKDWDAWHKQDLEDFIKRDRNHPSV
MMWSIGNEIREQFDSTGVRITRELAQIVKSLDKTRPVTSALTENEPQKNFIYQSGALDLL
GFNYKHADYATFPERFKGQKIVASESVSAYATRGHYDMPTDEIRFWPKKYGETFDGNSDL
TVTAYDNIASYWGTTHEENWKAAKKYDFIAGTFVWTGFDYIGEPDPYPYPARSSYFGIVD
LAGFPKDVYYMYQSEWSDKNVLHLLPHWNWKVGQLIDVWAYYNNADEVELFLNGKSLGSK
AKQGDELHIAWKVPFEAGTLKAVSRKAGKIVKETEIHTAGEAAKINLQADKTAIKNDGYH
LAYVTVTLQDKDGNALPKADNLINFKVSGGAKIVGVDNGYQASLEPFKANYRKLYNGKCL
VILQSNKKAENITLEATTAGNISLGTVNIKVE