PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_067643566.1 NCBI__GCF_001632775.1:WP_067643566.1 (682 amino acids)

SeqID: WP_067643566.1 NCBI__GCF_001632775.1:WP_067643566.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598210: fatty-acid oxidation complex alpha-subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_067643566.1 NCBI__GCF_001632775.1:WP_067643566.1
MFEGLRFQHWQIDIDAEDIATLTLDRAGSPVNALSRAVLDEFDQIVERLSFEPPRGLVIR
SGKSAGFVVGADLKEFAGYEQGGSVIDQIRNGQAVFERLARLRCPTAVAIHGHCMGGGTE
LSLACNYRIASDDASTRIGLPEVKLGIFPGWGGSARLPRLIGAPKALEFMLTGRTASAAS
ARALGLVDAIATPERLLDVAKEWVRRRPAPPFGRRALAWATNLWPVRQALAPVLRKQTAA
KARPEHYPAPFALIETWRRGGSSIRQRLDLEARAVAKLAQTPTCRNLIRVFFLQERLKAQ
GAGVEHGIVRIHVVGAGVMGGDIAAWAALRGFEVTLQDREDAYVRPAIERGRALFAKKLR
APERVEAASRRLVADVEGAGVAEADLVIEAIFENLEAKQALYRQLEPRMKPGALLASNTS
SIPLDELRAAVATPGRFLGLHYFNPVALMPLVEIVRHDRLDPAAEKRAAALCKALDKLPI
AVAGTPGFLVNRILMPYLLEAIRILKEGVPAPVIDKVARKFGMPMGPIELADTIGLDVCA
SVGRELAPFLGLDLPEGIDTQLEAGHRGKKTGQGFYRWENGKPVKPEVDPKYVAPADLED
RLILPLLNEAVACLHDRVVDDADLLDAGVIFGTGFAPFRGGPIAHIRAVGAATLEARLGA
LAARHGPRFTARPGWDSPALKG