PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_067906659.1 NCBI__GCF_001519075.1:WP_067906659.1 (889 amino acids)

SeqID: WP_067906659.1 NCBI__GCF_001519075.1:WP_067906659.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 54294577: aconitate hydratase [Legionella pneumophila str. Lens]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_067906659.1 NCBI__GCF_001519075.1:WP_067906659.1
MTQVGQDTLGARSTLTVGGKDYAYYALGKAAAAYGDVSRLPFSMKVLLENLLRFEDGGFT
VSTDDIKALVDWQKDPSSSREIQYRPARVLLQDFTGVPCVVDLAAMRDAIAKLGGDTSRI
NPLVPVHLVIDHSVMVDEFGHPKAFEQNVEIEYYRNGERYDFLKWGSKSLANFKAVPPGT
GICHQVNLEHIAQAVWTSEGPDGTTVAYPDTCVGTDSHTTMINGLGVLGWGVGGIEAEAA
MLGQPVSMLIPEVVGFKFTGELKEGVTATDLVLTCTSMLRKHGVVGRFVEYYGPGLASLT
LADRATLANMAPEYGATCGFFGIDDKTLDYMRLTGRDENQIALTEAYAKAQGFWIDPSIE
PVFTSTLELDLGTVVPSLAGPKRPQDRVSLPDVDDVFNADMANTYKKAQQRVPVEGMDFD
IGDGDVTIAAITSCTNTSNPGVLVAAGLVAKKANELGLKPKPWVKTSLAPGSQVVTDYLV
RAGLQEHLDAVGFNLVGYGCTTCIGNSGPLAEPISKAINENGLVAAAVISGNRNFEGRVS
PDVRANFLASPPLVVAYALKGTVIEDFVSTPIGQSKDGVDVYLKDIWPSNHEVYETMAGC
MDRAMFQARYADVYKGDAHWQAINVAGSETYSWRAGSTYVANPPYFEGMTMTPAPVGDII
EAKPLAILGDSITTDHISPAGSIKADSPAGKWLMEHQVAKADFNSYGARRGHHEVMMRGT
FANIRIKNEMVPGIEGGMSRYGAEVGAIYDVAMQHKADGTPLVVIAGKEYGTGSSRDWAA
KGTNLLGVRAVIVESFERIHRSNLVGMGVLPLQFKDGESRQTLGLTGDDTFTIRGVAGLK
PRQDVEVEVTRADGSTFTFTALCRIDTANELEYYLNGGILHYVLRNLAA