PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_068112647.1 NCBI__GCF_001653335.1:WP_068112647.1 (936 amino acids)

SeqID: WP_068112647.1 NCBI__GCF_001653335.1:WP_068112647.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 54294577: aconitate hydratase [Legionella pneumophila str. Lens]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_068112647.1 NCBI__GCF_001653335.1:WP_068112647.1
MASKDSFGAKGTLDVDGTSYEIFRLDAVSGDGLDVASLPFSLKVLLENLLRTEDGSDITA
DDVKAIAGWDADADPSQEIQFTPARVIMQDFTGVPCVVDLATMREAMADLGGDPTKINPL
APAEMVIDHSVIADVFGTPEAFGRNVEIEYERNRERYQFLRWGQGAFDDFKVVPPGTGIV
HQVNIEHLARTVFTREVDGVLQAYPDTCVGTDSHTTMVNGIGVVGWGVGGIEAEAAMLGQ
PVSMLIPRVVGFKLNGDLPEGATATDLVLTITEMLREHGVVGKFVEFYGPGVSVLPLANR
ATIGNMSPEFGSTIAVFPIDEETTKYLELTGRTPEQIALVEAYAKEQGLWHDPDAEPRFS
EKLELDLATVVPSLAGPKRPQDRVSLSEAKESFRSALADYAEDTDAQETKGYDENVEESF
PASDTPHNGHGEAPPNGHVAAGSGAGGRPRNPAQVTLADGTSFELDHGAVTIAAITSCTN
TSNPSVMIGAALLAKKAVEKGLERKPWVKTTLAPGSKVVSDYYEKSGLTPYLDKLGFNLV
GYGCTTCIGNSGPLIPEVSQAVNDNDLAVVSVLSGNRNFEGRINPDVKMNYLASPPLVVA
YALAGSMDVDLFNDPLGQDTEGNDVYMKDIWPTSAEIEEVVASAITSDMFDDGYADVFAG
DEQWRSLPTPEGKTFEWDAESTYVRKPPYFDGMPQEPEPVTDIDGARVLLKLGDSVTTDH
ISPAGAIKKDSPAGHYLAEHGVEQRDFNSYGSRRGNHEVMIRGTFANIRLRNQMAPGTEG
GFTRYLDGGEDSVTSVFEASEKYIAAGVPLVVLAGKEYGSGSSRDWAAKGTALLGVKAVI
AESYERIHRSNLIGMGVLPLQYPEGESAESLGLTGEETFSVSGVTELNDGTTPRTVKVTA
DGVEFDAVVRIDTPGEANYYRNGGIMQYVLRNLLRG