PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_073036524.1 NCBI__GCF_900129305.1:WP_073036524.1 (881 amino acids)

SeqID: WP_073036524.1 NCBI__GCF_900129305.1:WP_073036524.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2506131: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_073036524.1 NCBI__GCF_900129305.1:WP_073036524.1
MSARARLEKDGETFEFVDLKGLFGNRLGRLPYSIRVLLENVVRRRDDRLVTERDVENLAG
WRGRYAEPVEIPFFPARVLMQDFTGVPAVADLAAMRDALVALGKDPAAVNPLVPVDLVVD
HSVQVDFFGTSDALTANVRREYERNGERYTFLKWAQKSFENFRVVPPNSGICHQVNLEHL
SRVFWDRKEDGVRICFPDTVVGLDSHTTMVNGIGVLGWGVGGIEAEAVLMGQPYSMAIPE
VIGVRLVGRLPRRANATDLVLRVTEALRDYGVVEKFVEFFGPAVTALSVPARATIANMSP
EYGATVGFFPVDEKVVEYLRLTHRERQARVTEAAARAMGLYYDGSEEPDYTDVLEIDLSA
IRPAVAGPSKPKDRIELSELKTRFRQLRGEDAPKAAVPVRIRGENVELSDGSVVIAAITS
CTNTSNPHALLGAALLARNAVKRGLAVPAHVKTSLAPGSKVVVQYLDRSGLLPYLEALGF
HPVAFGCTTCIGNSGPLHPEVERAIEEHNLNVAAVLSGNRNFEARIHQKVKSNFLASPLL
VVAFALAGRVDVDLEKEPVGLDPNGGPVFLADILPDDEEIEELVNRYVQEDLFRETYEKI
LEGDQFWNELQVQESVTYPWDPRSTYIKCPPYFEGFTPQMPETTDIRGARVLLWLGDAVT
TDHISPAGAIHEDYPAGRYLKSLGLSRQEFNSYGARRGNHEVMMRGTFANIRIRNKLVSE
PGSFTVKFPEGERMYVFEAAEAYRREGVPLIVLGGKEYGTGSSRDWAAKGPKLLGVKAVI
AESFERIHRSNLIGMGILPLQFLEGESAESLGLDGTEEYHIAGIAGIEPRRKLTVTAVKD
GKEKTFQVLARLDTEIEADYYRNGGILDYVLRKMAGSDQAP