PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_083491847.1 NCBI__GCF_001431535.1:WP_083491847.1 (837 amino acids)

SeqID: WP_083491847.1 NCBI__GCF_001431535.1:WP_083491847.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            OuterMembrane                 [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598931: homoserine dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    OuterMembrane          6.58
    Periplasmic            2.99
    Extracellular          0.26
    CytoplasmicMembrane    0.17
    Cytoplasmic            0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

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Predict transmembrane helices and signal peptides: Phobius

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Input

>WP_083491847.1 NCBI__GCF_001431535.1:WP_083491847.1
MSIAAAAPSADSAPPRSAVQPHVVVHKFGGTSVADADCYRHVARLLQARPEALQVTVVSA
MKGVTDALIALARLAAAGDAQWREDWHDLRARHRGAAASLLGEHAGASVEWLDARFDELA
ELLAALAVIGGLPEEVLDRVQGLGEVCSAHLLGQHFQASGEPCAVLDAREVLVVEHGELG
VNVDWETSAQRLHAWRQANVQQRIVVTGFIARDRRDRITTLGRNGSDYSGAIFAALFNAD
ELQIWTDVDGVLSADPRLVPEAVQLEALSYDEACELAYFGAKVVHPQTMSPAIQRGLPIL
IRNTFQPEHPGTRITAERSVRGPIKGLTLSAELAVLNLEGTGLIGVPGTAERVFSALRQA
QVSVVMISQGSSEHSICCVVRGNESERGRDALLQAFAHELAVGQVQRVQLRGGVSVLAAV
GDGMAGQPGVAARLFESLGRAQVNILAIAQGSSERNISVAVDSGDATRALRAAHAGFWLS
PQTFAVGVIGPGNVGAALLDQLQAAQPQLLGKANIDLRLRAVASRRGMHLAPRALQGPWR
AALADAASASDLDAFTAHLLSAHLPHAVVIDCSGSAEVAGRYEGWLAAGIHVVTPNKQAG
SGPLARYQSIRAAAAASGARFRYEATVGAGLPVITTLRDLVDTGDEVLSIEGIFSGTLAW
LFNRFDGSQPFSALVEQARGMGYTEPDPRDDLSGIDVARKLVILAREAGRDLSLEQVQVE
SLVPEALRAGSVDAFMQRLGDNDDALLQRLQQARARGAVLRYVAALSAQGASVGLVEIPL
DHAFANLKLTDNVVQFRTRRYCDNPLVVQGPGAGPEVTAAGVFADLLRVAAGEGARL