PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_092685791.1 NCBI__GCF_900110435.1:WP_092685791.1 (905 amino acids)

SeqID: WP_092685791.1 NCBI__GCF_900110435.1:WP_092685791.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 54294577: aconitate hydratase [Legionella pneumophila str. Lens]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_092685791.1 NCBI__GCF_900110435.1:WP_092685791.1
MTSLDSFKCRKILKVGSKSYVYYSLPTAEKNGLKGISRLPYSMKVLLENLLRNEDDRTVK
KADIQAVAKWMRKKALEHEIAFRPARVLMQDFTGVPAVVDLAAMRNAMQALGGDAEKINP
LVPVDLVIDHSVIVNFFGDNKAFGKNVAEEYKQNQERYEFLKWGQKAFSNFAVVPPGTGI
CHQVNLEYLAQTVWTRKEKMTIGKKKGTFEVAYPDSLVGTDSHTTMVNGLAVLGWGVGGI
EAEAAMLGQPLSMLLPEVVGFKLKGALKEGVTATDLVLTVTQMLRKQGVVGKFVEFFGPG
LDHLSVADKSTIANMAPEYGATCGFFPVDTETLDYLKTSGRASARVALVEKYAKAQGLFR
TAKSADPVFTVTLTLDLASVVPSLAGPKRPEGRVALPTVSEGFTAAMDAEYKKALDGARY
AVDGRKFDLGHGDVVIAAITSCTNTSNPSVLIGAGLLARNAAAKGLKAAPWVKTSLAPGS
QVVAEYLANSGLQKDLDKVGFNLVGFGCTTCIGNSGPLPEDISKSINDNGIVAAAVLSGN
RNFEGRVSPDVQANYLASPPLVVAYALAGTVTKNLAVEPIGTGKDGKPVYLKDIWPTTKE
INAFVKKYVTAAIFKKKYADVFKGDTNWRKIKTVDSETYKWNMSSTYVQNPPYFEGMKMQ
PEPIVDVVDARILAVFGDKITTDHISPAGSIKLTSPAGKYLSEHQVRPADFNQYGTRRGN
HEVMMRGTFANIRIKNHMLKGADGNIPEGGLTKHWPDGDQMSIYDAAMKYQAEQVPLVVF
AGAEYGNGSSRDWAAKGTRLLGVRAVICQSFERIHRSNLVGMGVLPLTFEDGTSWASLGI
KGDEKVTIRGLQGDLKPRQTLTAEIKAGNGKVKRVPLLCRIDTLDELEYYRNGGILHYVL
RKLAA