PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_095512259.1 NCBI__GCF_002283365.1:WP_095512259.1 (906 amino acids)

SeqID: WP_095512259.1 NCBI__GCF_002283365.1:WP_095512259.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2506131: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_095512259.1 NCBI__GCF_002283365.1:WP_095512259.1
MADSLFDARDTIDTSAGAHTVYRLDRVAEATGADLDRLPFSIKVLLENALRQADLPGPVG
EDDVRNLATYDPAAPAEVEIPFTPARVLLQDFTGVPAVVDLAALRSAMARNGGDPEAINP
RVPVDLVIDHSVQVDSFALPQAFQINADIEFQRNAERYEFLRWGSKAFDNFSVVPPERGI
CHQVNLEYIARAVWTTPGDDGLPVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAML
GQPIYMLMPKVVGFRLNGKLKEGVTATDLTLTVTQMLRKHGVVGKFVEFFGTGLSSMSLP
DRATIANMAPEYGATMGFFPIDDETLDYLRRTNRDEATVELVEAYCKAQGLFRTDDTPDP
QFEAVLELDLSEVEPSMSGPKRPQDRIVLGDVQREFKASLTRPASPQGFGLKEDALDNTG
AYKDDEGNELDLKHGDVVIAAITSCTNTSNPSVMLAAGLLAKKAVERGMTVPPYVKTSLA
PGSRVVTAYLEKAGLQDYLDQIGYNLVGYGCTTCIGNSGPLPEPVAEAITDGDLVVAGVL
SGNRNFEGRIHALVKANYLASPPLVVAYALAGTVDIDLQNDVIGQDQDGNDVYLKDLWPS
QQEILDAINQAVTREQFEELYEGIEDSNPRWNAIDTSEGAVYDWQDDSTYIQEPPFFLDV
TPEVPTIEPIRGAKTLVKAGDSTTTDHISPAGAIPKSEPAGQYLQDHGVEPKDFNSFGSR
RGNDRVMTRGTFGNIRLRNQLAPGTEGGWTMKDGEQMYIYDAAQEYAAEGTPLLVFAGVD
YGMGSSRDWAAKGTLLLGIEAVVAKSFERIHRSNLVGMGVLPLLFQDGESLDTHGLDGTE
QFDIPVDDDVRPGQTLTVTATKGDGSTVAFDVTVALNTPVEVEYYRHGGILNYVLRDYMA
GELETA