PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_104485039.1 NCBI__GCF_002936955.1:WP_104485039.1 (949 amino acids)

SeqID: WP_104485039.1 NCBI__GCF_002936955.1:WP_104485039.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 1172699: Phosphoenolpyruvate-protein phosphotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    Extracellular          0.01
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            9.26

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_104485039.1 NCBI__GCF_002936955.1:WP_104485039.1
MFSLTAQDVKTGVPLADKAAVIQALADWLEQDGHVAAGYGAGMLTREAQNSTYLGQGIAI
PHGTQECRHLIKNTGIKAMHLPDGVPWGGGERAYLVLGIAAGSDEHLDLLKQLARTLSRD
GLFERVKAARQSQEVLQLLQGNAESATETKFVLSADRVAVKARAGTLELLVEQAATLMQL
NPTEESALQQSAGMYIGQGWWLKQIPADDKPGAALLTASGITHRQQPVSGLLALAVRGSE
HKTLLTRVADWLAAGRGAELAGQDSAEALLNVLKRGPVSLSSHQRTVVVRNTHGLHARPG
AMLVQAAKNFDADIQVCNLDGDEHWVSAKSLMKMIGLGVKAGHQLVFRAEGPDAEAALDA
LTEAVNGGLGEAFVAQATEPQAEEHDIHEPQGIDPNTLVRGVAASPGIAIGPVFVDAPLR
FDYPQQAGDTQAEQQKLSAAIEQASAELSATLRRLSDTQARDMMSMHRELLADSSLTQGV
SCRIKQGQSAAAAWWSEIDSAADRQAASSDALLAERAADIRDIGRRVMAILCHSRMTPPP
EHPYLWLAQDIGPSQLVNLDPSRVLGLVTVGGGASSHSAILARSLGIPALVAAGGAVMAL
PSGTEAILNGDDGTLWVAPEAAMLEQARVRQQREREQAEQDWMRRHDAAITLDGHRIGVA
ANLADTGQAREVMEVGAEGVGLLRTEFVFMARHSEPDLDEQLAFYRQAFDALDGRPLVAR
TLDVGGDKPLPYWPVPKEDNPFLGVRGIRLCMQKPELLKTQLRALLMAAGDRPLRIMFPM
VADWSEWRWAKALFDKIQSEVQATDVQVGIMVEVPSVALNAAVFAEEVDFFSIGTNDLTQ
YTLAMDRGNGGLARLSDGLNPAVLRLIKMVVDAAHAKGKWVGVCGELASDPVALPLLLGL
GVDELSVSLKRVTLVKAQVREWSLSSCRKLAEQALQAVDAPAVRQLYNN