PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on WP_111609172.1 NCBI__GCF_003259225.1:WP_111609172.1 (586 amino acids)

SeqID: WP_111609172.1 NCBI__GCF_003259225.1:WP_111609172.1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595550: dihydroxy-acid dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>WP_111609172.1 NCBI__GCF_003259225.1:WP_111609172.1
MSESEKNKFVPKAWPRKLRSTEWFGGTSRDHIYHRSWMKNQGLPADLFDGRPVIGICNTW
SQLTPCNAHLRELADRVKHGIYEAGGLPLEFPVFSVGESSLRPTAMMYRNMAAMDVEEAL
RANPLDGVVLLAGCDKTTPALLMGACSVDIPAIVVSGGPMLNGYFRGERVGSGTALWQMS
EDIKAGKMTQEDFLEAEQSMSRSAGGCNTMGTASTMASMAEALGMALSGNAAIPAVDSRR
RVMAHLTGRRIVDMVKDDLKPSDILTRQAFENAIRVNGAIGGSTNAVIHLLAIAGRVGVD
LNLDDWDKLGQNIATIVNLMPSGKYLMEEFFYAGGLPVVIKHLAEAGKLHKNAITVSGES
IWDEVKEVRNWNPDVILPVEKALTQKGGIVVLKGNLAPLGAVLKPSAASAHLLQHRGRAV
VFEDIDDYKAKINDEALDIDEHCVMVLKNCGPKGYPGMAEVGNMGLPPKVLRKGIKDMVR
ISDARMSGTAYGTVVLHTTPEAAAGGPLAVIQNGDMIELDVENRRLHVDISDEEMATRLA
NWKSHLEAPKSGYIKLFHDHVQGADTGADFDFLKGCRGAAVPKDSH