SitesBLAST
Comparing 16149 b2041 dTDP-glucose 4,6 dehydratase, NAD(P)-binding (NCBI) to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1kewA The crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from salmonella enterica serovar typhimurium with thymidine diphosphate bound (see paper)
88% identity, 100% coverage: 1:361/361 of query aligns to 1:361/361 of 1kewA
- active site: T133 (= T133), D134 (= D134), E135 (= E135), L152 (= L152), L154 (= L154), F155 (= F155), T158 (= T158), Y167 (= Y167), K171 (= K171)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), A9 (= A9), G10 (= G10), F11 (= F11), I12 (= I12), D32 (= D32), K33 (= K33), L34 (= L34), T35 (= T35), A37 (= A37), G38 (= G38), A57 (= A57), D58 (= D58), I59 (= I59), L80 (= L80), A81 (= A81), A82 (= A82), S84 (= S84), T99 (= T99), I131 (= I131), S132 (= S132), T133 (= T133), Y167 (= Y167), K171 (= K171), C194 (= C194), S195 (= S195), N196 (= N196), N197 (= N197)
- binding thymidine-5'-diphosphate: H85 (= H85), V86 (= V86), E135 (= E135), N196 (= N196), K206 (= K206), L207 (= L207), P222 (= P222), I223 (= I223), Y224 (= Y224), R231 (= R231), N266 (= N266), R297 (= R297), H300 (= H300), Y357 (= Y357)
1keuA The crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from salmonella enterica serovar typhimurium with dtdp-d-glucose bound (see paper)
88% identity, 100% coverage: 1:361/361 of query aligns to 1:361/361 of 1keuA
- active site: T133 (= T133), D134 (= D134), E135 (= E135), L152 (= L152), L154 (= L154), F155 (= F155), T158 (= T158), Y167 (= Y167), K171 (= K171)
- binding 2'deoxy-thymidine-5'-diphospho-alpha-d-glucose: S84 (= S84), H85 (= H85), V86 (= V86), T133 (= T133), D134 (= D134), E135 (= E135), Y167 (= Y167), S195 (= S195), N196 (= N196), K206 (= K206), L207 (= L207), P222 (= P222), I223 (= I223), Y224 (= Y224), R231 (= R231), N266 (= N266), R297 (= R297), H300 (= H300), Y304 (= Y304), Y357 (= Y357)
- binding nicotinamide-adenine-dinucleotide: G7 (= G7), A9 (= A9), G10 (= G10), F11 (= F11), I12 (= I12), D32 (= D32), K33 (= K33), L34 (= L34), T35 (= T35), A37 (= A37), G38 (= G38), A57 (= A57), D58 (= D58), I59 (= I59), L80 (= L80), A81 (= A81), A82 (= A82), S84 (= S84), T99 (= T99), I131 (= I131), S132 (= S132), T133 (= T133), Y167 (= Y167), K171 (= K171), C194 (= C194), S195 (= S195), N196 (= N196), N197 (= N197)
P26391 dTDP-glucose 4,6-dehydratase; EC 4.2.1.46 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
88% identity, 100% coverage: 1:361/361 of query aligns to 1:361/361 of P26391
P27830 dTDP-glucose 4,6-dehydratase 2; EC 4.2.1.46 from Escherichia coli (strain K12) (see 2 papers)
74% identity, 97% coverage: 2:350/361 of query aligns to 3:347/355 of P27830
- FI 12:13 (= FI 11:12) binding
- DKLT 33:36 (= DKLT 32:35) binding
- DI 59:60 (= DI 58:59) binding
- T100 (= T99) binding
- D135 (= D134) active site, Proton donor
- E136 (= E135) active site, Proton acceptor
- Y160 (= Y167) active site, Proton acceptor
- YSASK 160:164 (= YSASK 167:171) binding
- N190 (= N197) binding
1bxkB Dtdp-glucose 4,6-dehydratase from e. Coli
72% identity, 97% coverage: 2:350/361 of query aligns to 3:341/344 of 1bxkB
- active site: S125 (≠ N124), T134 (= T133), D135 (= D134), E136 (= E135), S158 (= S165), Y160 (= Y167), S161 (= S168), K164 (= K171)
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), A10 (= A9), G11 (= G10), F12 (= F11), I13 (= I12), D33 (= D32), K34 (= K33), L35 (= L34), T36 (= T35), A38 (= A37), G39 (= G38), V58 (≠ A57), D59 (= D58), I60 (= I59), L81 (= L80), A82 (= A81), A83 (= A82), T100 (= T99), I132 (= I131), S133 (= S132), T134 (= T133), Y160 (= Y167), K164 (= K171), C187 (= C194), S188 (= S195), N189 (= N196), N190 (= N197)
8du1A Crystal structure of NAD bound dtdp-glucose 4,6-dehydratase from elizabethkingia anophelis
55% identity, 98% coverage: 3:357/361 of query aligns to 6:360/361 of 8du1A
- binding nicotinamide-adenine-dinucleotide: G10 (= G7), A12 (= A9), G13 (= G10), F14 (= F11), I15 (= I12), D36 (= D32), A37 (≠ K33), L38 (= L34), T39 (= T35), A41 (= A37), G42 (= G38), A61 (= A57), D62 (= D58), I63 (= I59), L84 (= L80), A85 (= A81), A86 (= A82), T103 (= T99), V142 (≠ I131), S143 (= S132), T144 (= T133), Y169 (= Y167), K173 (= K171), C196 (= C194), S197 (= S195), N198 (= N196), N199 (= N197)
2hunA Crystal structure of hypothetical protein ph0414 from pyrococcus horikoshii ot3
47% identity, 94% coverage: 1:340/361 of query aligns to 2:312/329 of 2hunA
- active site: T125 (= T133), D126 (= D134), E127 (= E135), Y149 (= Y167), K153 (= K171)
- binding nicotinamide-adenine-dinucleotide: G8 (= G7), M10 (≠ A9), G11 (= G10), F12 (= F11), I13 (= I12), D34 (= D32), K35 (= K33), L36 (= L34), G37 (≠ T35), Y38 (= Y36), G39 (≠ A37), S40 (≠ G38), G59 (≠ A57), D60 (= D58), V61 (≠ I59), L80 (= L80), A81 (= A81), A82 (= A82), S84 (= S84), S99 (≠ T99), V123 (≠ I131), S124 (= S132), T125 (= T133), Y149 (= Y167), K153 (= K171), C176 (= C194), T177 (≠ S195), N178 (= N196), N179 (= N197)
P95780 dTDP-glucose 4,6-dehydratase; EC 4.2.1.46 from Streptococcus mutans serotype c (strain ATCC 700610 / UA159) (see paper)
45% identity, 99% coverage: 3:361/361 of query aligns to 7:344/348 of P95780
1kerB The crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from streptococcus suis with dtdp-d-glucose bound (see paper)
45% identity, 99% coverage: 3:361/361 of query aligns to 6:343/347 of 1kerB
- active site: T124 (= T133), D125 (= D134), E126 (= E135), Y160 (= Y167), K164 (= K171)
- binding 2'deoxy-thymidine-5'-diphospho-alpha-d-glucose: S85 (= S84), H86 (= H85), N87 (≠ V86), T124 (= T133), D125 (= D134), E126 (= E135), Y160 (= Y167), C187 (= C194), S188 (= S195), N189 (= N196), K199 (= K206), F200 (≠ L207), R203 (≠ L210), Q204 (≠ V211), K215 (≠ P222), L216 (≠ I223), Y217 (= Y224), R224 (= R231), N259 (= N266), R283 (= R297), H286 (= H300), Y290 (= Y304), Y339 (= Y357)
- binding nicotinamide-adenine-dinucleotide: G10 (= G7), A12 (= A9), G13 (= G10), F14 (= F11), I15 (= I12), L35 (vs. gap), D36 (= D32), K37 (= K33), L38 (= L34), T39 (= T35), A41 (= A37), G42 (= G38), G60 (≠ A57), D61 (= D58), I62 (= I59), Y81 (≠ L80), A82 (= A81), A83 (= A82), S85 (= S84), T100 (= T99), V122 (≠ I131), S123 (= S132), T124 (= T133), Y160 (= Y167), K164 (= K171), C187 (= C194), S188 (= S195), N189 (= N196), N190 (= N197), K199 (= K206)
1ketA The crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from streptococcus suis with thymidine diphosphate bound (see paper)
45% identity, 99% coverage: 3:361/361 of query aligns to 5:342/346 of 1ketA
- active site: T123 (= T133), D124 (= D134), E125 (= E135), Y159 (= Y167), K163 (= K171)
- binding nicotinamide-adenine-dinucleotide: G9 (= G7), A11 (= A9), G12 (= G10), F13 (= F11), I14 (= I12), D35 (= D32), K36 (= K33), L37 (= L34), T38 (= T35), A40 (= A37), G41 (= G38), G59 (≠ A57), D60 (= D58), I61 (= I59), Y80 (≠ L80), A81 (= A81), A82 (= A82), S84 (= S84), T99 (= T99), V121 (≠ I131), S122 (= S132), T123 (= T133), Y159 (= Y167), K163 (= K171), C186 (= C194), S187 (= S195), N188 (= N196), N189 (= N197), K198 (= K206)
- binding thymidine-5'-diphosphate: H85 (= H85), N86 (≠ V86), E125 (= E135), N188 (= N196), K198 (= K206), F199 (≠ L207), R202 (≠ L210), Q203 (≠ V211), K214 (≠ P222), L215 (≠ I223), Y216 (= Y224), R223 (= R231), N258 (= N266), R282 (= R297), H285 (= H300)
1kepA The crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb) from streptococcus suis with dtdp-xylose bound (see paper)
45% identity, 99% coverage: 3:361/361 of query aligns to 5:342/346 of 1kepA
- active site: T123 (= T133), D124 (= D134), E125 (= E135), Y159 (= Y167), K163 (= K171)
- binding nicotinamide-adenine-dinucleotide: G9 (= G7), A11 (= A9), G12 (= G10), F13 (= F11), I14 (= I12), D35 (= D32), K36 (= K33), L37 (= L34), T38 (= T35), A40 (= A37), G41 (= G38), G59 (≠ A57), D60 (= D58), I61 (= I59), Y80 (≠ L80), A81 (= A81), A82 (= A82), S84 (= S84), T99 (=