SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 16236 FitnessBrowser__Keio:16236 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
32% identity, 76% coverage: 46:230/243 of query aligns to 53:235/553 of B5Z7I3

query
sites
B5Z7I3
F
 
F
A
 
I
A
 
D
L
 
L
A
 
L
L
 
A
A
 
Q
H
 
H
F
 
F
W
 
I
L
 
I
V
 
V
G
 
A
I
 
L
S
 
S
S
 
G
L
 
F
F
 
L
A
 
V
V
 
L
I
 
V
I
 
F
G
 
G
T
 
V
G
 
L
A
 
I
G
 
G
I
 
V
A
 
F
V
 
A
T
 
F
R
 
-
P
 
-
W
 
Y
G
 
N
A
 
S
E
 
K
F
 
A
R
 
R
P
 
A
L
 
F
V
 
L
E
 
L
T
 
P
I
 
V
A
 
V
A
 
N
V
 
F
G
 
L
Q
 
Y
T
 
T
F
 
I
P
 
P
P
 
S
V
 
L
A
 
A
V
 
L
L
 
F
A
 
A
I
 
L
A
 
F
V
 
I
P
 
P
V
 
V
I
 
I
G
 
G
F
 
V
G
 
G
L
 
L
Q
 
K
P
 
N
A
 
A
I
 
L
I
 
L
A
 
V
L
 
L
I
 
V
L
 
L
Y
 
Y
G
 
G
V
 
L
L
 
L
P
 
P
V
 
I
L
 
V
Q
 
Y
A
 
S
T
 
T
L
 
Y
A
 
N
G
 
A
L
 
L
G
 
K
A
 
E
I
 
V
D
 
R
A
 
E
S
 
E
V
 
V
T
 
I
E
 
K
V
 
A
A
 
A
K
 
I
G
 
G
M
 
L
G
 
G
M
 
C
S
 
N
R
 
P
G
 
K
Q
 
E
R
 
L
V
 
F
R
 
F
K
 
R
V
 
V
E
 
H
L
 
F
P
 
L
L
 
L
A
 
A
A
 
I
P
 
P
V
 
Q
I
 
I
L
 
L
A
 
A
G
 
G
V
 
L
R
 
R
T
 
I
S
 
A
V
 
V
I
 
V
I
 
M
N
 
L
I
 
V
G
 
A
T
 
M
A
 
A
T
 
G
I
 
I
A
 
G
S
 
A
T
 
L
V
 
I
G
 
G
A
 
A
S
 
G
T
 
G
L
 
L
G
 
G
T
 
Q
P
 
A
I
 
I
I
 
F
I
 
R
G
 
G
L
 
L
S
 
N
G
 
T
F
 
Q
N
 
N
T
 
T
A
 
T
Y
 
L
V
 
L
I
 
V
Q
 
A
G
 
G
A
 
S
L
 
L
L
 
I
V
 
I
A
 
A
L
 
L
A
 
F
A
 
S
I
 
V
I
 
L
A
 
A
D
 
D
R
 
K
L
 
F

Sites not aligning to the query:

Query Sequence

>16236 FitnessBrowser__Keio:16236
MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGIS
SLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIA
LILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRVRKVELPLAAPVILAGVRTSVI
INIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQ
HAK

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory