SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 16492 FitnessBrowser__Keio:16492 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
41% identity, 81% coverage: 4:90/108 of query aligns to 2:87/650 of O31645

query
sites
O31645
K
 
K
L
 
L
I
 
L
A
 
A
L
 
I
C
 
T
A
 
S
C
|
C
P
 
P
M
 
N
G
 
G
L
 
I
A
 
A
H
 
H
T
 
T
F
 
Y
M
 
M
A
 
A
A
 
A
Q
 
E
A
 
N
L
 
L
E
 
Q
E
 
K
A
 
A
A
 
A
V
 
D
E
 
R
A
 
L
G
 
G
Y
 
V
E
 
S
V
 
I
K
 
K
I
 
V
E
 
E
T
 
T
Q
 
Q
G
 
G
A
 
G
D
 
I
G
 
G
I
 
V
Q
 
E
N
 
N
R
 
K
L
 
L
T
 
T
A
 
E
Q
 
E
D
 
E
I
 
I
A
 
R
E
 
E
A
 
A
T
 
D
I
 
A
I
 
I
I
 
I
H
 
I
S
 
A
V
 
-
A
 
A
V
 
D
T
 
R
P
 
S
E
 
V
D
 
N
N
 
K
E
 
D
R
 
R
F
 
F
E
 
I
S
 
G
R
 
K
D
 
K
V
 
L
Y
 
L
E
 
S
I
 
V
T
 
G
L
 
V
Q
 
Q
D
 
D
A
 
G
I
 
I
K
 
R

Sites not aligning to the query:

P20966 PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Escherichia coli (strain K12) (see paper)
38% identity, 94% coverage: 3:104/108 of query aligns to 104:201/563 of P20966

query
sites
P20966
K
 
K
K
 
R
L
 
V
I
 
V
A
 
A
L
 
V
C
 
T
A
 
A
C
|
C
P
 
P
M
 
T
G
 
G
L
 
V
A
 
A
H
 
H
T
 
T
F
 
F
M
 
M
A
 
A
A
 
A
Q
 
E
A
 
A
L
 
I
E
 
E
E
 
T
A
 
E
A
 
A
V
 
K
E
 
K
A
 
R
G
 
G
Y
 
W
E
 
W
V
 
V
K
 
K
I
 
V
E
 
E
T
 
T
Q
 
R
G
 
G
A
 
S
D
 
V
G
 
G
I
 
A
Q
 
G
N
 
N
R
 
A
L
 
I
T
 
T
A
 
P
Q
 
E
D
 
E
I
 
V
A
 
A
E
 
A
A
 
A
T
 
D
I
 
L
I
 
V
I
 
I
H
 
-
S
 
-
V
 
V
A
 
A
V
 
A
T
 
D
P
 
I
E
 
E
-
 
V
D
 
D
N
 
L
E
 
A
R
 
K
F
 
F
E
 
A
S
 
G
R
 
K
D
 
P
V
 
M
Y
 
Y
E
 
R
I
 
T
T
 
S
L
 
T
Q
 
G
D
 
L
A
 
A
I
 
L
K
 
K
N
 
K
A
 
T
A
 
A
G
 
-
I
 
-
I
 
-
K
 
Q
E
 
E
I
 
L
E
 
D
E
 
K
M
 
A
I
 
V
A
 
A

Query Sequence

>16492 FitnessBrowser__Keio:16492
MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATI
IIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ

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SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory