Comparing 17155 FitnessBrowser__Keio:17155 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
3w7uA Escherichia coli k12 ygjk complexed with galactose (see paper)
100% identity, 97% coverage: 24:783/783 of query aligns to 1:760/760 of 3w7uA
3w7tA Escherichia coli k12 ygjk complexed with mannose (see paper)
100% identity, 97% coverage: 24:783/783 of query aligns to 1:760/760 of 3w7tA
3w7sA Escherichia coli k12 ygjk complexed with glucose (see paper)
100% identity, 97% coverage: 24:783/783 of query aligns to 1:760/760 of 3w7sA
5gw7B Crystal structure of the glycosynthase mutant e727a of escherichia coli gh63 glycosidase in complex with glucose and lactose (see paper)
100% identity, 97% coverage: 24:783/783 of query aligns to 1:760/760 of 5gw7B
6xuxA Crystal structure of megabody mb-nb207-cygjk_no (see paper)
100% identity, 59% coverage: 24:484/783 of query aligns to 309:769/879 of 6xuxA
Sites not aligning to the query:
4wvcA Crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with tris and d-glycerate (see paper)
34% identity, 17% coverage: 640:770/783 of query aligns to 283:406/413 of 4wvcA
Sites not aligning to the query:
4wvbA Crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with glucose (see paper)
35% identity, 17% coverage: 640:770/783 of query aligns to 264:387/394 of 4wvbA
Sites not aligning to the query:
6g3nA Mycobacterial hydrolase complex 14.
30% identity, 15% coverage: 656:770/783 of query aligns to 324:438/445 of 6g3nA
Sites not aligning to the query:
>17155 FitnessBrowser__Keio:17155
MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV
QKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIA
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
EQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
RKQ
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory