Comparing 17344 FitnessBrowser__Keio:17344 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
P15770 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Escherichia coli (strain K12) (see paper)
100% identity, 100% coverage: 1:272/272 of query aligns to 1:272/272 of P15770
1nytA Shikimate dehydrogenase aroe complexed with NADP+ (see paper)
100% identity, 100% coverage: 1:271/272 of query aligns to 1:271/271 of 1nytA
Q9KVT3 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
50% identity, 99% coverage: 1:270/272 of query aligns to 5:274/278 of Q9KVT3
3pgjA 2.49 angstrom resolution crystal structure of shikimate 5- dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate
51% identity, 99% coverage: 1:270/272 of query aligns to 1:270/272 of 3pgjA
P43876 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (see paper)
49% identity, 99% coverage: 1:270/272 of query aligns to 1:271/272 of P43876
1p77A Crystal structure of shikimate dehydrogenase (aroe) from haemophilus influenzae (see paper)
48% identity, 99% coverage: 1:270/272 of query aligns to 1:264/265 of 1p77A
3sefA 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
50% identity, 99% coverage: 1:270/272 of query aligns to 1:266/268 of 3sefA
3sefC 2.4 angstrom resolution crystal structure of shikimate 5-dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. N16961 in complex with shikimate and NADPH
47% identity, 99% coverage: 1:270/272 of query aligns to 1:243/244 of 3sefC
Q5HNV1 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (see paper)
35% identity, 98% coverage: 4:270/272 of query aligns to 3:269/269 of Q5HNV1
3dooA Crystal structure of shikimate dehydrogenase from staphylococcus epidermidis complexed with shikimate (see paper)
35% identity, 97% coverage: 4:267/272 of query aligns to 3:257/258 of 3dooA
P56119 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
35% identity, 92% coverage: 1:249/272 of query aligns to 3:242/263 of P56119
2hk9B Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
33% identity, 93% coverage: 2:254/272 of query aligns to 7:252/267 of 2hk9B
2hk9A Crystal structure of shikimate dehydrogenase from aquifex aeolicus in complex with shikimate and NADP+ at 2.2 angstrom resolution (see paper)
33% identity, 93% coverage: 2:254/272 of query aligns to 7:252/269 of 2hk9A
3phiA Shikimate 5-dehydrogenase (aroe) from helicobacter pylori in complex with shikimate and NADPH
35% identity, 92% coverage: 1:249/272 of query aligns to 3:239/259 of 3phiA
4fosA Crystal structure of shikimate dehydrogenase (aroe) q237a mutant from helicobacter pylori in complex with shikimate
34% identity, 92% coverage: 1:249/272 of query aligns to 3:242/263 of 4fosA
O67049 Shikimate dehydrogenase (NADP(+)); SD; SDH; EC 1.1.1.25 from Aquifex aeolicus (strain VF5) (see paper)
33% identity, 93% coverage: 2:254/272 of query aligns to 7:252/269 of O67049
3phjA Shikimate 5-dehydrogenase (aroe) from helicobacter pylori in complex with 3-dehydroshikimate
35% identity, 92% coverage: 1:249/272 of query aligns to 3:234/255 of 3phjA
1nvtB Crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with NADP+ (see paper)
32% identity, 94% coverage: 6:260/272 of query aligns to 16:275/287 of 1nvtB
1nvtA Crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with NADP+ (see paper)
32% identity, 94% coverage: 6:260/272 of query aligns to 16:275/287 of 1nvtA
Q58484 Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
32% identity, 94% coverage: 6:260/272 of query aligns to 11:270/282 of Q58484
>17344 FitnessBrowser__Keio:17344
METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANV
TVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGL
RILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHE
FDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGM
LVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA
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Lawrence Berkeley National Laboratory