Comparing 17920 FitnessBrowser__Keio:17920 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
P32140 Sulfoquinovose isomerase; SQ isomerase; Sulfoquinovose-sulfofructose isomerase; SQ-SF isomerase; EC 5.3.1.31 from Escherichia coli (strain K12) (see paper)
100% identity, 100% coverage: 1:413/413 of query aligns to 1:413/413 of P32140
7ag4D Crystal structure of active site mutant of sq isomerase (yihs-h248a) from salmonella enterica in complex with sulfofructose (sf) (see paper)
92% identity, 100% coverage: 1:413/413 of query aligns to 13:425/425 of 7ag4D
2zblA Functional annotation of salmonella enterica yihs-encoded protein (see paper)
92% identity, 100% coverage: 1:412/413 of query aligns to 1:412/416 of 2zblA
3wkiA Crystal structure of cellobiose 2-epimerase in complex with cellobiitol (see paper)
22% identity, 86% coverage: 14:368/413 of query aligns to 19:372/407 of 3wkiA
Sites not aligning to the query:
3wkhA Crystal structure of cellobiose 2-epimerase in complex with epilactose (see paper)
22% identity, 86% coverage: 14:368/413 of query aligns to 19:372/410 of 3wkhA
Sites not aligning to the query:
3wkgA Crystal structure of cellobiose 2-epimerase in complex with glucosylmannose (see paper)
22% identity, 86% coverage: 14:368/413 of query aligns to 19:372/410 of 3wkgA
Sites not aligning to the query:
8h1lB Crystal structure of glucose-2-epimerase in complex with d-glucitol from runella slithyformis runsl_4512 (see paper)
20% identity, 85% coverage: 12:361/413 of query aligns to 25:381/423 of 8h1lB
Sites not aligning to the query:
>17920 FitnessBrowser__Keio:17920
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
SVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEA
FLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFR
AFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVY
TVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSW
WQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory