SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 199280 FitnessBrowser__MR1:199280 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P47148 Peroxisomal protein 2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
32% identity, 73% coverage: 9:102/128 of query aligns to 174:266/283 of P47148

query
sites
P47148
G
 
G
L
 
L
A
 
R
K
 
H
L
 
W
T
 
N
E
 
S
I
 
I
D
 
Y
G
 
N
E
 
K
A
 
V
G
 
S
E
 
T
K
 
R
V
 
V
I
 
V
R
 
N
S
 
N
L
 
L
A
 
N
D
 
S
I
 
S
C
 
Y
P
 
P
D
 
D
L
 
L
G
 
W
K
 
Y
Y
 
Y
I
 
T
I
 
L
E
 
V
Y
 
H
P
 
V
F
 
Y
G
 
G
D
 
P
I
 
L
Y
 
F
Q
 
A
-
 
F
R
 
D
E
 
E
G
 
I
L
 
L
D
 
S
L
 
A
K
 
Q
T
 
E
R
 
T
E
 
S
L
 
L
V
 
V
T
 
I
V
 
I
A
 
A
A
 
S
L
 
L
T
 
V
A
 
P
L
 
-
G
 
Q
H
 
D
C
 
V
Q
 
N
P
 
P
Q
 
Q
L
 
L
N
 
R
V
 
G
H
 
H
I
 
L
N
 
K
G
 
G
A
 
A
L
 
L
N
 
N
V
 
I
G
 
G
C
 
C
T
 
D
P
 
-
K
 
K
E
 
E
I
 
T
V
 
V
E
 
E
V
 
A
I
 
V
L
 
R
Q
 
G
M
 
L
S
 
A
V
 
I

Sites not aligning to the query:

Query Sequence

>199280 FitnessBrowser__MR1:199280
MSNQRYVQGLAKLTEIDGEAGEKVIRSLADICPDLGKYIIEYPFGDIYQREGLDLKTREL
VTVAALTALGHCQPQLNVHINGALNVGCTPKEIVEVILQMSVYAGFPAALNGMFVAKTVF
SERELSAV

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory