SitesBLAST
Comparing 201109 FitnessBrowser__MR1:201109 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6zgbA Glutamate transporter homologue glttk in complex with a photo cage compound (see paper)
43% identity, 92% coverage: 14:417/437 of query aligns to 11:422/425 of 6zgbA
6xwnB Structure of glutamate transporter homologue glttk in the presence of tboa inhibitor (see paper)
43% identity, 92% coverage: 14:417/437 of query aligns to 13:424/426 of 6xwnB
5e9sA Crystal structure of substrate-bound glutamate transporter homologue glttk (see paper)
43% identity, 92% coverage: 14:417/437 of query aligns to 13:424/427 of 5e9sA
- binding aspartic acid: R274 (≠ A274), S275 (= S275), S276 (= S276), T313 (= T313), G353 (= G353), V354 (= V354), A357 (≠ V357), G358 (= G358), D394 (= D387), R397 (= R390), T398 (= T391)
- binding decyl-beta-d-maltopyranoside: L194 (≠ R193), G198 (≠ L197), Y202 (≠ L201)
- binding sodium ion: Y87 (= Y95), T90 (= T98), S91 (≠ T99), S276 (= S276), G305 (= G305), A306 (= A306), T307 (= T307), N309 (= N309), N309 (= N309), M310 (= M310), D311 (= D311), S348 (= S348), I349 (= I349), G350 (= G350), T351 (= T351), N401 (= N394), V402 (= V395), D405 (= D398)
6zl4A The structure of glutamate transporter homologue glttk in complex with the photo switchable compound (cis) (see paper)
43% identity, 92% coverage: 14:417/437 of query aligns to 10:421/424 of 6zl4A
- binding decyl-beta-d-maltopyranoside: L191 (≠ R193), G195 (≠ L197), R282 (≠ E285)
- binding (2~{S},3~{S})-2-azanyl-3-[[4-[2-(4-methoxyphenyl)hydrazinyl]phenyl]methoxy]butanedioic acid: R271 (≠ A274), S272 (= S275), S273 (= S276), M307 (= M310), T310 (= T313), G353 (= G356), A354 (≠ V357), R394 (= R390), T395 (= T391)
Sites not aligning to the query:
O59010 Glutamate transporter homolog; Glt(Ph); Sodium-aspartate symporter Glt(Ph); Sodium-dependent aspartate transporter from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
43% identity, 92% coverage: 13:416/437 of query aligns to 14:423/425 of O59010
- S65 (= S70) mutation to V: Strongly decreased chloride conductance.
- R276 (≠ A274) mutation to S: Increased rate of aspartate transport; when associated with R-395.
- RSS 276:278 (≠ ASS 274:276) binding
- M311 (= M310) mutation to A: Decreased dependence of aspartate binding on Na(+) concentration.
- T314 (= T313) binding
- V355 (= V354) binding
- D394 (= D387) binding
- M395 (= M388) mutation to R: Increased rate of aspartate transport; when associated with S-276.
- R397 (= R390) mutation to A: Strongly decreased affinity for aspartate.
- N401 (= N394) binding
- D405 (= D398) mutation to N: Strongly decreased affinity for aspartate.
6r7rA Crystal structure of the glutamate transporter homologue glttk in complex with d-aspartate (see paper)
44% identity, 92% coverage: 14:417/437 of query aligns to 6:413/416 of 6r7rA
- binding d-aspartic acid: R263 (≠ A274), S265 (= S276), M299 (= M310), T302 (= T313), T340 (= T351), G342 (= G353), V343 (= V354), G347 (= G358), D383 (= D387), R386 (= R390), T387 (= T391), N390 (= N394)
- binding decyl-beta-d-maltopyranoside: H23 (≠ N31), V212 (≠ F222), A216 (≠ V226)
6bavA Crystal structure of gltph r397c in complex with s-benzyl-l-cysteine (see paper)
43% identity, 91% coverage: 13:410/437 of query aligns to 6:409/409 of 6bavA
6bauA Crystal structure of gltph r397c in complex with l-cysteine (see paper)
43% identity, 91% coverage: 13:409/437 of query aligns to 6:408/408 of 6bauA
- binding cysteine: S270 (= S276), M303 (= M310), T306 (= T313), A345 (= A352), G346 (= G353), V347 (= V354), G351 (= G358), D386 (= D387), C389 (≠ R390), T390 (= T391), N393 (= N394)
2nwwA Crystal structure of gltph in complex with tboa (see paper)
42% identity, 91% coverage: 13:409/437 of query aligns to 5:407/407 of 2nwwA
6x15A Inward-facing state of the glutamate transporter homologue gltph in complex with l-aspartate and sodium ions (see paper)
42% identity, 91% coverage: 13:410/437 of query aligns to 14:417/419 of 6x15A
- binding [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate: F46 (≠ I51), F46 (≠ I51), P75 (= P81), L91 (≠ F97), F95 (≠ L101), L130 (≠ F135), I133 (≠ V138), I159 (≠ V164), Y167 (≠ H172), K196 (≠ R193), G200 (≠ L197), I207 (≠ Y204), F210 (= F207), L250 (= L247), I262 (= I260), M269 (≠ Q267), T334 (≠ S333), V335 (≠ L334), G336 (≠ T335), T340 (≠ A339), L343 (≠ V342), M399 (≠ A392)
- binding aspartic acid: S277 (= S275), S278 (= S276), T314 (= T313), G354 (= G353), A358 (≠ V357), G359 (= G358), D394 (= D387), R397 (= R390), T398 (= T391)
- binding sodium ion: Y89 (= Y95), T92 (= T98), S93 (≠ T99), G306 (= G305), T308 (= T307), N310 (= N309), N310 (= N309), M311 (= M310), D312 (= D311), S349 (= S348), I350 (= I349), T352 (= T351), N401 (= N394), V402 (= V395), D405 (= D398)
Sites not aligning to the query:
6x14A Inward-facing state of the glutamate transporter homologue gltph in complex with tfb-tboa (see paper)
42% identity, 91% coverage: 13:409/437 of query aligns to 11:413/413 of 6x14A