Comparing 201412 FitnessBrowser__MR1:201412 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
43% identity, 64% coverage: 7:180/273 of query aligns to 103:271/280 of 7bw9A
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
43% identity, 62% coverage: 7:174/273 of query aligns to 82:253/261 of 6wyeA
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
47% identity, 59% coverage: 10:170/273 of query aligns to 83:243/243 of 4n69A
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
41% identity, 60% coverage: 7:170/273 of query aligns to 81:244/250 of 4hzdA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
43% identity, 60% coverage: 7:170/273 of query aligns to 80:243/243 of 7ra4A
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
43% identity, 63% coverage: 3:173/273 of query aligns to 80:250/272 of 3gvdI
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
43% identity, 63% coverage: 3:173/273 of query aligns to 73:243/258 of 8i04A
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
43% identity, 59% coverage: 10:171/273 of query aligns to 80:241/257 of 1ssqD
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
43% identity, 63% coverage: 3:173/273 of query aligns to 76:246/246 of 8i09A
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
42% identity, 63% coverage: 3:173/273 of query aligns to 77:247/262 of 1t3dA
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
43% identity, 62% coverage: 3:170/273 of query aligns to 77:244/244 of 8i06A
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
42% identity, 60% coverage: 10:173/273 of query aligns to 80:243/258 of 4h7oA
Sites not aligning to the query:
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
45% identity, 59% coverage: 10:170/273 of query aligns to 79:233/233 of 4n6bA
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
43% identity, 57% coverage: 7:162/273 of query aligns to 105:268/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
43% identity, 57% coverage: 7:162/273 of query aligns to 103:266/267 of 3q1xA
1sstA Serine acetyltransferase- complex with coa (see paper)
42% identity, 59% coverage: 10:170/273 of query aligns to 80:233/233 of 1sstA
Q8Z9S7 Bifunctional protein GlmU; EC 2.7.7.23; EC 2.3.1.157 from Yersinia pestis
31% identity, 42% coverage: 49:163/273 of query aligns to 316:438/456 of Q8Z9S7
4fceA Crystal structure of yersinia pestis glmu in complex with alpha-d- glucosamine 1-phosphate (gp1)
31% identity, 42% coverage: 49:163/273 of query aligns to 308:430/441 of 4fceA
Sites not aligning to the query:
P07464 Galactoside O-acetyltransferase; GAT; Acetyl-CoA:galactoside 6-O-acetyltransferase; Thiogalactoside acetyltransferase; Thiogalactoside transacetylase; EC 2.3.1.18 from Escherichia coli (strain K12) (see 3 papers)
29% identity, 45% coverage: 76:198/273 of query aligns to 78:199/203 of P07464
Sites not aligning to the query:
1krrA Galactoside acetyltransferase in complex with acetyl-coenzyme a (see paper)
29% identity, 45% coverage: 76:198/273 of query aligns to 77:198/200 of 1krrA
>201412 FitnessBrowser__MR1:201412
MGVIARLKEDIESIYHRDPAARSAFEILVNYPGMHAIWLHRISHKLWKRDWRLMARCLST
FSRWLTGVEIHPGATIGNRFFIDHGMGVVIGETAEIGDDCTLYHGVTLGGTTWQAGKRHP
TLGNNVVVGAGAKILGPITMHDGARVGSNSVVVKDVPKDTTVVGIPGRVVATPSPQSKEK
SERRSAMAKKYGFDAYAVSPDNPDPVANAIGQMLDHMHLMDSKVQELCQAIQRLGGDVCT
ERLPELNVGDFNDVEKAAADKRQSALDEFDPSI
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory