Comparing 201707 FitnessBrowser__MR1:201707 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
1nxjA Structure of rv3853 from mycobacterium tuberculosis (see paper)
46% identity, 90% coverage: 7:153/164 of query aligns to 9:155/156 of 1nxjA
2yjvC Crystal structure of e. Coli regulator of ribonuclease activity a (rraa) bound to fragment of dead-box protein rhlb (see paper)
39% identity, 94% coverage: 6:159/164 of query aligns to 5:158/158 of 2yjvC
>201707 FitnessBrowser__MR1:201707
MLDLLPDLFDHYPSKLTLLPLAFRAFGGKRLFWGEVVTVKCFEDNSKVKEVLAQPGHGKV
LIVDGGGSSRRALLGDLIAQSAMDNGWQGVIINGYVRDAARLSSFNLGVYALGAMPMKTE
KLDQGQINVPIELGCVTVKPGMMVYVDENGIAISEESLNFAFLN
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory