SitesBLAST
Comparing 201879 FitnessBrowser__MR1:201879 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
6ed7A Crystal structure of 7,8-diaminopelargonic acid synthase bound to inhibitor mac13772
59% identity, 91% coverage: 6:426/461 of query aligns to 5:419/429 of 6ed7A
- active site: Y17 (= Y18), Y144 (= Y151), D245 (= D252), K274 (= K281)
- binding 2-[(2-nitrophenyl)sulfanyl]acetohydrazide: Y17 (= Y18), W52 (= W53), W52 (= W53), Y144 (= Y151), D147 (= D154), A217 (= A224), K274 (= K281), R391 (= R398), F393 (= F400), F393 (= F400)
- binding pyridoxal-5'-phosphate: G112 (= G113), S113 (= S114), Y144 (= Y151), H145 (= H152), D245 (= D252), I247 (= I254), K274 (= K281)
P12995 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Escherichia coli (strain K12) (see 4 papers)
59% identity, 91% coverage: 6:426/461 of query aligns to 5:419/429 of P12995
- Y17 (= Y18) mutation to F: Severely reduces the aminotransferase activity.
- W52 (= W53) binding substrate
- GS 112:113 (= GS 113:114) binding pyridoxal 5'-phosphate
- Y144 (= Y151) mutation to F: Severely reduces the aminotransferase activity.
- D147 (= D154) mutation to N: Loss of aminotransferase activity.
- D245 (= D252) binding pyridoxal 5'-phosphate
- R253 (= R260) mutation to A: Has only a small effect on the rate of reaction with DAPA.; mutation to K: Increases aminotransferase activity toward SAM.; mutation to M: Loss of aminotransferase activity.; mutation to Q: Increases aminotransferase activity toward SAM.
- K274 (= K281) binding substrate; modified: N6-(pyridoxal phosphate)lysine
- G307 (= G314) binding substrate
- PT 308:309 (= PT 315:316) binding pyridoxal 5'-phosphate
- R391 (= R398) binding substrate; mutation to A: Reduces aminotransferase activity.
1mlzA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the trans-isomer of amiclenomycin. (see paper)
59% identity, 91% coverage: 6:426/461 of query aligns to 5:418/427 of 1mlzA
- active site: Y17 (= Y18), Y144 (= Y151), E210 (= E218), D244 (= D252), A247 (= A255), K273 (= K281), Y397 (= Y405)
- binding pyridoxal-5'-phosphate: G112 (= G113), S113 (= S114), Y144 (= Y151), H145 (= H152), D244 (= D252), I246 (= I254), K273 (= K281), P307 (= P315), T308 (= T316)
- binding trans-amiclenomycin: W52 (= W53), W53 (= W54), Y144 (= Y151), K273 (= K281), R390 (= R398), F392 (= F400)
1mlyA Crystal structure of 7,8-diaminopelargonic acid synthase in complex with the cis isomer of amiclenomycin (see paper)
59% identity, 91% coverage: 6:426/461 of query aligns to 5:418/427 of 1mlyA
- active site: Y17 (= Y18), Y144 (= Y151), E210 (= E218), D244 (= D252), A247 (= A255), K273 (= K281), Y397 (= Y405)
- binding cis-amiclenomycin: W52 (= W53), W53 (= W54), K273 (= K281), R390 (= R398), F392 (= F400)
- binding pyridoxal-5'-phosphate: G112 (= G113), S113 (= S114), Y144 (= Y151), H145 (= H152), D244 (= D252), I246 (= I254), K273 (= K281), P307 (= P315), T308 (= T316)
1dtyA Crystal structure of adenosylmethionine-8-amino-7-oxonanoate aminotransferase with pyridoxal phosphate cofactor.
58% identity, 91% coverage: 6:426/461 of query aligns to 5:419/429 of 1dtyA
- active site: Y17 (= Y18), Y144 (= Y151), E211 (= E218), D245 (= D252), A248 (= A255), K274 (= K281), Y398 (= Y405)
- binding pyridoxal-5'-phosphate: G112 (= G113), S113 (= S114), Y144 (= Y151), H145 (= H152), D245 (= D252), I247 (= I254), K274 (= K281)
1qj3A Crystal structure of 7,8-diaminopelargonic acid synthase in complex with 7-keto-8-aminopelargonic acid (see paper)
58% identity, 91% coverage: 6:426/461 of query aligns to 5:407/416 of 1qj3A
- active site: Y17 (= Y18), Y144 (= Y151), E201 (= E218), D235 (= D252), A238 (= A255), K264 (= K281), Y386 (= Y405)
- binding 7-keto-8-aminopelargonic acid: Y17 (= Y18), W52 (= W53), Y144 (= Y151), K264 (= K281), R379 (= R398), F381 (= F400)
- binding pyridoxal-5'-phosphate: G112 (= G113), S113 (= S114), Y144 (= Y151), H145 (= H152), G146 (= G153), D235 (= D252), I237 (= I254), A238 (= A255), K264 (= K281)
6erkA Crystal structure of diaminopelargonic acid aminotransferase from psychrobacter cryohalolentis (see paper)
51% identity, 92% coverage: 8:430/461 of query aligns to 8:415/420 of 6erkA
4w1vA Crystal structure of 7,8-diaminopelargonic acid synthase (bioa) from mycobacterium tuberculosis, complexed with a thiazole inhibitor (see paper)
50% identity, 91% coverage: 10:428/461 of query aligns to 10:420/425 of 4w1vA
- active site: Y18 (= Y18), Y147 (= Y151), E210 (= E218), D244 (= D252), A247 (= A255), K273 (= K281), Y397 (= Y405)
- binding dimethyl (2R)-5-(3-fluorophenyl)-1H-pyrrolo[1,2-c][1,3]thiazole-6,7-dicarboxylate 2-oxide: P17 (= P17), Y18 (= Y18), W54 (= W53), M81 (= M80), G83 (= G82), Y147 (= Y151), G306 (= G314), P307 (= P315), T308 (= T316), F392 (= F400)
- binding pyridoxal-5'-phosphate: G114 (= G113), S115 (= S114), Y147 (= Y151), H148 (= H152), E210 (= E218), D244 (= D252), I246 (= I254), K273 (= K281)
4cxrA Mycobaterium tuberculosis transaminase bioa complexed with 1-(1,3- benzothiazol-2-yl)methanamine (see paper)
50% identity, 91% coverage: 10:428/461 of query aligns to 10:420/425 of 4cxrA
- active site: Y18 (= Y18), Y147 (= Y151), E210 (= E218), D244 (= D252), A247 (= A255), K273 (= K281), Y397 (= Y405)
- binding 1-(1,3-benzothiazol-2-yl)methanamine: Y18 (= Y18), W54 (= W53), W55 (= W54), A216 (= A224)
- binding pyridoxal-5'-phosphate: G114 (= G113), S115 (= S114), Y147 (= Y151), H148 (= H152), E210 (= E218), D244 (= D252), I246 (= I254), K273 (= K281), P307 (= P315), T308 (= T316)
4cxqA Mycobaterium tuberculosis transaminase bioa complexed with substrate kapa (see paper)
50% identity, 91% coverage: 10:428/461 of query aligns to 10:422/427 of 4cxqA
- active site: Y18 (= Y18), Y149 (= Y151), E212 (= E218), D246 (= D252), A249 (= A255), K275 (= K281), Y399 (= Y405)
- binding 7-keto-8-aminopelargonic acid: W56 (= W53), Y149 (= Y151), G308 (= G314), T310 (= T316), R392 (= R398)
- binding pyridoxal-5'-phosphate: G116 (= G113), S117 (= S114), Y149 (= Y151), H150 (= H152), G151 (= G153), E212 (= E218), D246 (= D252), I248 (= I254), K275 (= K281), P309 (= P315), T310 (= T316)
P9WQ81 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; 7,8-diaminopelargonic acid synthase; DAPAS; Diaminopelargonic acid synthase; EC 2.6.1.62 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
50% identity, 91% coverage: 10:428/461 of query aligns to 17:430/437 of P9WQ81