SitesBLAST – Find functional sites

 

SitesBLAST

Comparing 203047 FitnessBrowser__MR1:203047 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
28% identity, 98% coverage: 2:145/147 of query aligns to 501:646/650 of O31645

query
sites
O31645
E
 
K
L
 
L
R
 
T
T
 
D
I
 
I
L
 
I
R
 
S
P
 
P
E
 
E
C
 
L
T
 
I
T
 
E
C
 
P
A
 
N
T
 
L
P
 
S
G
 
G
-
 
E
-
 
T
S
 
S
K
 
D
K
 
D
K
 
I
V
 
I
L
 
D
E
 
E
L
 
L
I
 
I
S
 
Q
D
 
K
L
 
L
A
 
S
A
 
R
A
 
-
Q
 
R
Y
 
G
P
 
A
T
 
L
L
 
L
S
 
S
S
 
E
Q
 
S
A
 
G
I
 
F
F
 
K
E
 
Q
S
 
A
L
 
I
V
 
L
A
 
N
R
 
R
E
 
E
K
 
Q
M
 
Q
G
 
G
S
 
T
T
 
T
G
 
A
I
 
I
G
 
G
N
 
M
G
 
N
I
 
I
A
 
A
I
 
I
P
 
P
H
 
H
G
 
G
R
 
K
L
 
S
T
 
E
D
 
A
I
 
V
T
 
R
Q
 
E
P
 
P
-
 
S
I
 
V
A
 
A
I
 
F
L
 
G
I
 
I
K
 
K
C
 
-
E
 
R
E
 
S
P
 
G
I
 
V
A
 
D
F
 
W
D
 
N
A
 
S
I
 
L
D
 
D
K
 
G
Q
 
S
P
 
E
V
 
A
D
 
K
I
 
L
L
 
I
F
 
F
A
 
M
L
 
I
L
 
A
V
 
V
P
 
P
A
 
K
N
 
E
Q
 
S
-
 
G
C
 
G
Q
 
N
Q
 
Q
H
 
H
L
 
L
S
 
K
T
 
I
L
 
L
S
 
Q
C
 
M
M
 
L
A
 
S
E
 
R
K
 
K
L
 
L
S
 
M
D
 
D
K
 
D
Q
 
N
V
 
Y
L
 
R
K
 
E
Q
 
R
L
 
L
R
 
L
K
 
S
T
 
V
H
 
Q
D
 
T
E
 
T
T
 
E
E
 
E
L
 
A
Y
 
Y
Q
 
K
V
 
L
I
 
L

Sites not aligning to the query:

O31644 Transcriptional regulator ManR; Mannose operon transcriptional activator; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see paper)
35% identity, 51% coverage: 48:122/147 of query aligns to 552:626/648 of O31644

query
sites
O31644
V
 
V
A
 
M
R
 
R
E
 
E
K
 
K
M
 
M
G
 
S
S
 
A
T
 
T
G
 
N
I
 
I
G
 
G
N
 
S
G
 
G
I
 
I
A
 
A
I
 
I
P
 
P
H
|
H
G
 
A
R
 
N
L
 
A
T
 
K
D
 
F
I
 
I
T
 
K
Q
 
Q
P
 
S
I
 
A
A
 
I
I
 
A
L
 
I
I
 
A
K
 
T
C
 
L
E
 
K
E
 
E
P
 
P
I
 
L
A
 
E
F
 
W
D
 
-
A
 
-
I
 
-
D
 
G
K
 
N
Q
 
E
P
 
K
V
 
V
D
 
S
I
 
L
L
 
V
F
 
F
A
 
M
L
 
L
L
 
A
V
 
V
P
 
K
A
 
H
N
 
E
Q
 
D
-
 
Q
-
 
T
-
 
M
C
 
T
Q
 
K
Q
 
Q
H
 
L
L
 
F
S
 
S
T
 
E
L
 
L
S
 
S
C
 
Y
M
 
L
A
 
S
E
 
E
K
 
Q

Sites not aligning to the query:

Query Sequence

>203047 FitnessBrowser__MR1:203047
MELRTILRPECTTCATPGSKKKVLELISDLAAAQYPTLSSQAIFESLVAREKMGSTGIGN
GIAIPHGRLTDITQPIAILIKCEEPIAFDAIDKQPVDILFALLVPANQCQQHLSTLSCMA
EKLSDKQVLKQLRKTHDETELYQVIIG

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory