Comparing 206100 MicrobesOnline__882:206100 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
34% identity, 77% coverage: 67:292/295 of query aligns to 18:215/215 of 4ymtC
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
33% identity, 76% coverage: 67:290/295 of query aligns to 18:213/214 of 4ymwC
>206100 MicrobesOnline__882:206100
MPRRCGVSRAALMLDVAFLLVLVGGAAWFVWRMDDVIHYRWHWGRVLEGLVYVTPQGEWH
AGPLARGLAGTVRLSLWAMLAALLLGTVAGLLRTRRRLLARLLAGTYVDSVRNLPALVLI
FVMYFFISSLVLPALGLEESVRGLPPGGRAVVGWLFAPVEQLSAFLSAVVTLAIYEGAYI
SEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVPPLAGQFISIIKDSAIV
SVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVAERLERRFRWGL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory