Comparing 206137 MicrobesOnline__882:206137 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4n0qB Crystal structure of an abc transporter, substrate-binding protein from brucella melitensis 16m in complex with l-leucine using a crystal grown in a crystal former (microlytic)
32% identity, 90% coverage: 28:364/376 of query aligns to 3:335/345 of 4n0qB
1z18A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound valine (see paper)
32% identity, 91% coverage: 28:370/376 of query aligns to 3:338/344 of 1z18A
1z17A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound ligand isoleucine (see paper)
32% identity, 91% coverage: 28:370/376 of query aligns to 3:338/344 of 1z17A
1z16A Crystal structure analysis of periplasmic leu/ile/val-binding protein with bound leucine (see paper)
32% identity, 91% coverage: 28:370/376 of query aligns to 3:338/344 of 1z16A
1uskA L-leucine-binding protein with leucine bound (see paper)
31% identity, 91% coverage: 28:370/376 of query aligns to 3:340/345 of 1uskA
1usiA L-leucine-binding protein with phenylalanine bound (see paper)
31% identity, 91% coverage: 28:370/376 of query aligns to 3:340/345 of 1usiA
3ip9A Structure of atu2422-gaba receptor in complex with gaba (see paper)
32% identity, 90% coverage: 28:365/376 of query aligns to 3:334/348 of 3ip9A
3ip7A Structure of atu2422-gaba receptor in complex with valine (see paper)
32% identity, 90% coverage: 28:365/376 of query aligns to 3:334/348 of 3ip7A
3ip6A Structure of atu2422-gaba receptor in complex with proline (see paper)
32% identity, 90% coverage: 28:365/376 of query aligns to 3:334/348 of 3ip6A
3ip5A Structure of atu2422-gaba receptor in complex with alanine (see paper)
32% identity, 90% coverage: 28:365/376 of query aligns to 3:334/348 of 3ip5A
3ipcA Structure of atu2422-gaba f77a mutant receptor in complex with leucine (see paper)
32% identity, 90% coverage: 28:365/376 of query aligns to 3:334/348 of 3ipcA
4gnrA 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. Canada mdr_19a in complex with isoleucine
33% identity, 89% coverage: 28:361/376 of query aligns to 3:331/348 of 4gnrA
3td9A Crystal structure of a leucine binding protein livk (tm1135) from thermotoga maritima msb8 at 1.90 a resolution
29% identity, 88% coverage: 28:357/376 of query aligns to 2:326/350 of 3td9A
4q6bA Crystal structure of abc transporter substrate-binding protein fromdesulfitobacterium hafniense complex with leu
27% identity, 82% coverage: 51:360/376 of query aligns to 22:321/335 of 4q6bA
4mlcA Abc transporter substrate-binding protein fromdesulfitobacterium hafniense
27% identity, 82% coverage: 51:360/376 of query aligns to 22:322/336 of 4mlcA
4q6wA Crystal structure of periplasmic binding protein type 1 from bordetella pertussis tohama i complexed with 3-hydroxy benzoic acid
26% identity, 60% coverage: 28:252/376 of query aligns to 4:237/376 of 4q6wA
4jb0A Rhodopseudomonas palustris (strain cga009) rp1789 transport protein (see paper)
27% identity, 89% coverage: 41:374/376 of query aligns to 17:356/367 of 4jb0A
4eyqA Crystal structure of solute binding protein of abc transporter from rhodopseudomonas palustris haa2 in complex with caffeic acid/3-(4- hydroxy-phenyl)pyruvic acid (see paper)
27% identity, 89% coverage: 41:374/376 of query aligns to 20:359/361 of 4eyqA
4eygB Crystal structure of solute binding protein of abc transporter from rhodopseudomonas palustris bisb5 in complex with vanillic acid (see paper)
28% identity, 91% coverage: 29:369/376 of query aligns to 5:345/364 of 4eygB
3i45A Crystal structure of putative twin-arginine translocation pathway signal protein from rhodospirillum rubrum atcc 11170
27% identity, 81% coverage: 48:351/376 of query aligns to 24:329/378 of 3i45A
>206137 MicrobesOnline__882:206137
MKGVVRLLAVCMVTSLLMAATAFAAGPVRVGLMCPLTGKWASEGQDMRNIVELLAEEVNK
AGGINGNKVELIVEDDGGDPRTAALAAQKLSTSGVTAVIGTYGSAVTEASQNIYDEAGIA
QIATGSTNVRLTEKGLKLFLRTCPRDDEQGRVAAKVIKNKGYKAVALLHDNSSYAKGLAD
ETKALLDKDGTKIVFYDALTPGERDYTAILTKLKAANPDIIFFTGYYPEVGMLLRQKMEM
KWNVPMMGGDAANNLDLVKIAGKAAAKGYFFLSPPVPQDFDTAEAKAFLAAYKAKHNALP
NSVWSVLAGDAFKVIVEAVQKGGKADGAGIATYLKTQLKNYPGLSGQISFNEKGDRVGDL
YRVYDVNAEGEFVLQR
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory