Comparing 206268 MicrobesOnline__882:206268 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
3eleA Crystal structure of amino transferase (rer070207001803) from eubacterium rectale at 2.10 a resolution
39% identity, 95% coverage: 16:390/393 of query aligns to 16:391/398 of 3eleA
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
34% identity, 92% coverage: 28:390/393 of query aligns to 26:380/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
34% identity, 92% coverage: 28:390/393 of query aligns to 26:380/382 of 1gc3A
Sites not aligning to the query:
1b5oA Thermus thermophilus aspartate aminotransferase single mutant 1 (see paper)
34% identity, 92% coverage: 28:390/393 of query aligns to 26:380/382 of 1b5oA
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
34% identity, 93% coverage: 28:393/393 of query aligns to 26:383/385 of Q56232
Sites not aligning to the query:
1bkgA Aspartate aminotransferase from thermus thermophilus with maleate (see paper)
34% identity, 92% coverage: 28:390/393 of query aligns to 26:380/382 of 1bkgA
1bjwA Aspartate aminotransferase from thermus thermophilus (see paper)
34% identity, 92% coverage: 28:390/393 of query aligns to 26:380/382 of 1bjwA
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
35% identity, 92% coverage: 31:390/393 of query aligns to 34:377/384 of 1o4sB
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
30% identity, 91% coverage: 37:392/393 of query aligns to 37:392/402 of P14909
Sites not aligning to the query:
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
29% identity, 96% coverage: 15:390/393 of query aligns to 11:380/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
29% identity, 96% coverage: 15:390/393 of query aligns to 11:380/388 of 1gd9A
1j32A Aspartate aminotransferase from phormidium lapideum
27% identity, 90% coverage: 37:390/393 of query aligns to 32:382/388 of 1j32A
Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
30% identity, 89% coverage: 43:390/393 of query aligns to 39:394/400 of Q02635
Sites not aligning to the query:
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
30% identity, 89% coverage: 43:390/393 of query aligns to 38:393/399 of 6f77A
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
28% identity, 90% coverage: 38:390/393 of query aligns to 9:388/393 of 1xi9C
P0A959 Glutamate-pyruvate aminotransferase AlaA; EC 2.6.1.2 from Escherichia coli (strain K12) (see paper)
30% identity, 86% coverage: 35:373/393 of query aligns to 33:380/405 of P0A959
4cvqA Crystal structure of an aminotransferase from escherichia coli at 2. 11 angstroem resolution (see paper)
30% identity, 86% coverage: 35:373/393 of query aligns to 33:380/404 of 4cvqA
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
25% identity, 91% coverage: 37:392/393 of query aligns to 31:365/370 of Q58097
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
29% identity, 88% coverage: 43:386/393 of query aligns to 49:400/410 of P58350
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
26% identity, 89% coverage: 43:390/393 of query aligns to 39:388/391 of 8wkjA
>206268 MicrobesOnline__882:206268
MSLLSQQISGYMERASWIRKMFEAGIILKQQYGEDAVCDFSLGNPDLPAPAAVGDGLRAM
ADRAGEPFAFGYMPNGGYAWARQKLATHLSAEQGVSLTGDDVVLTCGAAGGLNAFFRAVL
DEGDEVLSMAPYFVEYGFYVENHGGVFRTVKTLPDTFGLDLDAIELAMTPRTRAVIINSP
NNPTGAVYSRAELEGLADILARASARNGRPVFLIADEPYRFLAFDGAEVPSVLPLYDHSL
VVSSFSKNLSLAGERLGYIALSPRMENRGKLAAGLLLTNRILGFVNPPVVGQHIMAAALG
AQVDASIYARRRDVMAEVLTEAGYDFQMPRGAFYFFPKAPGGDDVTFVSRLMEERILAVP
GSGFGGPGHFRLTFCVDETIIRRAAEGFRRARG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory