SitesBLAST
Comparing 208580 DVU3065 AMP-binding enzyme family protein to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q4WR83 Acyl-CoA ligase sidI; Siderophore biosynthesis protein I; EC 6.2.1.- from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata) (see paper)
39% identity, 98% coverage: 8:545/550 of query aligns to 36:577/590 of Q4WR83
Sites not aligning to the query:
- 6:14 PTS2-type peroxisomal targeting signal
P69451 Long-chain-fatty-acid--CoA ligase; Long-chain acyl-CoA synthetase; Acyl-CoA synthetase; EC 6.2.1.3 from Escherichia coli (strain K12) (see paper)
30% identity, 97% coverage: 7:541/550 of query aligns to 21:553/561 of P69451
- Y213 (= Y199) mutation to A: Loss of activity.
- T214 (= T200) mutation to A: 10% of wild-type activity.
- G216 (= G202) mutation to A: Decreases activity.
- T217 (= T203) mutation to A: Decreases activity.
- G219 (= G205) mutation to A: Decreases activity.
- K222 (= K208) mutation to A: Decreases activity.
- E361 (= E344) mutation to A: Loss of activity.
P9WQ37 Long-chain-fatty-acid--CoA ligase FadD13; Fatty acyl-CoA ligase; FACL; FACL13; Fatty acyl-CoA synthetase; ACS; FACS; Very-long-chain fatty-acyl-CoA synthetase; ACSVL; EC 6.2.1.3 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 4 papers)
30% identity, 98% coverage: 10:546/550 of query aligns to 3:502/503 of P9WQ37
- R9 (≠ D16) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-195; A-197 and A-244.
- R17 (≠ D24) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-197 and A-244.
- K172 (= K208) mutation to A: Slight reduction of the fatty acyl-CoA ligase activity. Slight increase of susceptibility to proteolysis.
- R195 (≠ T231) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-197 and A-244.
- R197 (≠ K233) mutation to A: Alteration of the strength of the membrane binding; when associated with A-9; A-17; A-195 and A-244.
- V209 (≠ C245) mutation to D: Strong reduction of the fatty acyl-CoA ligase activity. No significant change in the total expression level, however the cytoplasmic expression is reduced. Slight increase of susceptibility to proteolysis.
- A211 (≠ G247) mutation to G: Slight increase of the fatty acyl-CoA ligase activity. Reduced rate of proteolytic degradation.
- T214 (≠ L250) mutation to W: Shows a marked decrease in the activity with lauric and palmitic acid (C12 and C16 fatty acid) with a simultaneous increase in the activity with caprylic acid (C8 fatty acid).
- R244 (≠ K281) mutation to A: Alteration of the strength of the membrane binding; when associated with A-17; A-195; A-195 and A-197.
- A302 (≠ G341) mutation to G: Slight increase of the fatty acyl-CoA ligase activity. Reduced rate of proteolytic degradation.; mutation to W: Does not show activity with small, medium or long acyl chains.
- W377 (= W420) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. Enhanced affinity towards palmitic acid binding. No significant change in the total expression level, however the cytoplasmic expression is low. Slight increase of susceptibility to proteolysis.
- D382 (= D425) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. No significant change in the total expression level, however the cytoplasmic expression is reduced.
- R397 (= R440) mutation to A: Reduction of binding affinity for fatty acids.
- S404 (≠ R447) mutation to A: Slight reduction of the fatty acyl-CoA ligase activity. Enhanced affinity towards palmitic acid binding.
- G406 (= G449) mutation to L: No effect on the formation of acyl-adenylate intermediate. However, it shows very poor catalytic efficiency to form acyl-CoA.
- K487 (= K531) mutation to A: Strong reduction of the fatty acyl-CoA ligase activity. Reduction of binding affinity for ATP.
3r44A Mycobacterium tuberculosis fatty acyl coa synthetase (see paper)
29% identity, 98% coverage: 10:546/550 of query aligns to 6:502/502 of 3r44A
- active site: T167 (= T200), A184 (≠ N220), H208 (= H244), T304 (= T343), E305 (= E344), I403 (= I446), N408 (= N451), K487 (= K531)
- binding histidine: N6 (≠ T10), I7 (≠ L11), H178 (= H214), E179 (≠ V215), H182 (≠ G218)
Sites not aligning to the query:
Q9S725 4-coumarate--CoA ligase 2; 4CL 2; 4-coumarate--CoA ligase isoform 2; At4CL2; 4-coumaroyl-CoA synthase 2; Caffeate--CoA ligase; EC 6.2.1.12; EC 6.2.1.- from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
28% identity, 93% coverage: 29:542/550 of query aligns to 63:551/556 of Q9S725
- K211 (= K208) mutation to S: Drastically reduces the activity.
- M293 (≠ Y286) mutation M->A,P: Affects the substrate specificity.
- K320 (≠ I313) mutation K->L,A: Affects the substrate specificity.
- E401 (= E392) mutation to Q: Slighlty reduces the substrate specificity.
- C403 (≠ V394) mutation to A: Significantly reduces the substrate specificity.
- R449 (= R440) mutation to Q: Drastically reduces the activity.
- K457 (≠ G448) mutation to S: Drastically reduces the activity.
- K540 (= K531) mutation to N: Abolishes the activity.
O74976 Oxalate--CoA ligase; Oxalyl-CoA synthetase; Peroxisomal-coenzyme A synthetase; EC 6.2.1.8 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
28% identity, 92% coverage: 27:534/550 of query aligns to 18:497/512 of O74976
- S283 (≠ P320) modified: Phosphoserine
- S284 (≠ E321) modified: Phosphoserine
4gxqA Crystal structure of atp bound rpmatb-bxbclm chimera b1 (see paper)
32% identity, 64% coverage: 193:545/550 of query aligns to 156:505/506 of 4gxqA
- active site: T163 (= T200), N183 (= N220), H207 (= H244), T303 (= T343), E304 (= E344), I403 (= I446), N408 (= N451), A491 (≠ K531)
- binding adenosine-5'-triphosphate: T163 (= T200), S164 (= S201), G165 (= G202), T166 (= T203), T167 (= T204), K171 (= K208), H207 (= H244), S277 (= S317), A278 (≠ V318), P279 (≠ C319), E298 (≠ I338), R299 (≠ C339), Y300 (= Y340), G301 (= G341), M302 (≠ L342), T303 (= T343), V322 (= V365), D382 (= D425), I394 (= I437), R397 (= R440)
- binding carbonate ion: H207 (= H244), T208 (≠ C245), H209 (≠ F246), S277 (= S317), R299 (≠ C339), G301 (= G341), M302 (≠ L342), M307 (≠ V348)
Q5SKN9 Long-chain-fatty-acid--CoA ligase; Long-chain fatty acyl-CoA synthetase; LC-FACS; EC 6.2.1.3 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
29% identity, 98% coverage: 2:539/550 of query aligns to 11:532/541 of Q5SKN9
- T184 (= T200) binding
- W234 (≠ C248) binding
- G323 (≠ C339) binding
- T327 (= T343) binding
- E328 (= E344) binding
- D418 (= D425) binding
- K435 (= K442) binding
- K439 (≠ I446) binding
- W444 (≠ N451) binding
6qjzA Identificationand characterization of an oxalylfrom grass pea (lathyrus sativuscoa-synthetase l.) (see paper)
28% identity, 94% coverage: 10:525/550 of query aligns to 5:493/504 of 6qjzA