SitesBLAST
Comparing 209495 MicrobesOnline__882:209495 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
4zrnA Crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima (see paper)
35% identity, 97% coverage: 7:308/312 of query aligns to 4:304/309 of 4zrnA
- active site: T117 (≠ S121), G119 (= G123), A120 (= A124), Y143 (= Y146), K147 (= K150), Y181 (≠ S184), G185 (= G188)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), N32 (≠ R35), S34 (= S37), S35 (≠ R38), G36 (≠ R39), S51 (≠ D57), I52 (≠ F58), L73 (= L77), A74 (≠ V78), A75 (≠ S79), T92 (≠ E96), S115 (≠ A119), S116 (= S120), Y143 (= Y146), K147 (= K150), Y170 (≠ I173), V173 (≠ P176)
- binding uridine-5'-diphosphate-glucose: T117 (≠ S121), G119 (= G123), A120 (= A124), Y143 (= Y146), N172 (= N175), G185 (= G188), V186 (= V189), H201 (= H204), F203 (≠ W206), Y208 (≠ V211), R210 (= R213), V244 (≠ L248), R267 (= R271), D270 (= D274)
2p5uA Crystal structure of thermus thermophilus hb8 udp-glucose 4-epimerase complex with NAD
34% identity, 96% coverage: 4:303/312 of query aligns to 1:302/311 of 2p5uA
- active site: T117 (≠ S121), G119 (= G123), A120 (= A124), Y143 (= Y146), K147 (= K150), H181 (≠ S184), G185 (= G188)
- binding nicotinamide-adenine-dinucleotide: G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (vs. gap), N32 (vs. gap), L33 (vs. gap), A34 (≠ S34), T35 (≠ R35), G36 (≠ D36), D51 (= D57), L52 (≠ F58), Q73 (≠ L77), A74 (≠ V78), A75 (≠ S79), A77 (≠ T81), S116 (= S120), Y143 (= Y146), K147 (= K150), V173 (≠ P176)
6dntA Udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid (see paper)
32% identity, 91% coverage: 1:283/312 of query aligns to 1:281/310 of 6dntA
- active site: S120 (= S121), S121 (≠ G122), A122 (= A124), Y144 (= Y146), K148 (= K150), A187 (≠ G188)
- binding (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid: A80 (≠ T81), S120 (= S121), S121 (≠ G122), Y144 (= Y146), F172 (≠ S174), N173 (= N175), A187 (≠ G188), V188 (= V189), K191 (≠ V192), V203 (≠ H204), I204 (≠ V205), Y205 (≠ W206), Q210 (≠ V211), R212 (= R213), I246 (≠ L248), R269 (= R271), D272 (= D274)
- binding nicotinamide-adenine-dinucleotide: G10 (= G10), G13 (= G13), F14 (= F14), I15 (≠ L15), D33 (≠ F33), N34 (≠ S34), L35 (≠ R35), S36 (≠ D36), S37 (= S37), G38 (≠ R38), D57 (= D57), L58 (≠ F58), L76 (= L77), A77 (≠ V78), A78 (≠ S79), A80 (≠ T81), S118 (≠ A119), S119 (= S120), Y144 (= Y146), K148 (= K150), Y171 (≠ I173), V174 (≠ P176)
- binding zinc ion: E209 (≠ S210), H275 (≠ Y277)
7ysmA Crystal structure of udp-glucose 4-epimerase (rv3634c) co-crystallized with udp-n-acetylglucosamine from mycobacterium tuberculosis
36% identity, 96% coverage: 4:301/312 of query aligns to 1:301/311 of 7ysmA
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), N32 (≠ R35), T35 (≠ S37), G36 (≠ R38), D56 (≠ F58), I57 (≠ F59), L77 (= L77), A78 (≠ V78), A79 (≠ S79), I81 (≠ T81), T119 (≠ A119), Y146 (= Y146), K150 (= K150), P173 (≠ I173), N175 (= N175), V176 (≠ P176)
- binding uridine-diphosphate-n-acetylgalactosamine: I81 (≠ T81), R84 (≠ K84), S121 (= S121), G123 (= G123), S124 (≠ A124), Y146 (= Y146), A174 (≠ S174), N175 (= N175), G188 (= G188), V189 (= V189), F193 (= F193), R204 (≠ H204), V205 (= V205), F206 (≠ W206), N211 (≠ V211), R213 (= R213), D248 (≠ L248), R271 (= R271)
7ys9A Crystal structure of udp-glucose 4-epimerase (rv3634c) in complex with both udp-glucose and udp-galactose in chaina from mycobacterium tuberculosis
36% identity, 96% coverage: 4:301/312 of query aligns to 1:301/310 of 7ys9A
- binding galactose-uridine-5'-diphosphate: I81 (≠ T81), R84 (≠ K84), S121 (= S121), G123 (= G123), Y146 (= Y146), A174 (≠ S174), N175 (= N175), A187 (≠ Q187), G188 (= G188), V189 (= V189), F193 (= F193), R204 (≠ H204), F206 (≠ W206), N211 (≠ V211), R213 (= R213), D248 (≠ L248), R271 (= R271)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), N32 (≠ R35), A34 (≠ D36), T35 (≠ S37), G36 (≠ R38), D56 (≠ F58), I57 (≠ F59), L77 (= L77), A78 (≠ V78), A79 (≠ S79), I81 (≠ T81), T119 (≠ A119), Y146 (= Y146), K150 (= K150), P173 (≠ I173), A174 (≠ S174), V176 (≠ P176)
- binding uridine-5'-diphosphate-glucose: I81 (≠ T81), R84 (≠ K84), S121 (= S121), G123 (= G123), Y146 (= Y146), A174 (≠ S174), N175 (= N175), A187 (≠ Q187), G188 (= G188), V189 (= V189), F193 (= F193), R204 (≠ H204), F206 (≠ W206), N211 (≠ V211), R213 (= R213), D248 (≠ L248), R271 (= R271)
7ystA Crystal structure of udp-glucose 4-epimerase (rv3634c) in complex with both udp-glucose and udp-galactose in chain b from mycobacterium tuberculosis
36% identity, 96% coverage: 4:301/312 of query aligns to 1:301/312 of 7ystA
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), N32 (≠ R35), T35 (≠ S37), G36 (≠ R38), D56 (≠ F58), I57 (≠ F59), L77 (= L77), A78 (≠ V78), A79 (≠ S79), I81 (≠ T81), V96 (≠ E96), T119 (≠ A119), Y146 (= Y146), K150 (= K150), P173 (≠ I173), A174 (≠ S174), N175 (= N175), V176 (≠ P176)
- binding uridine-5'-diphosphate-glucose: I81 (≠ T81), R84 (≠ K84), S121 (= S121), G123 (= G123), Y146 (= Y146), A174 (≠ S174), N175 (= N175), A187 (≠ Q187), G188 (= G188), V189 (= V189), F193 (= F193), R204 (≠ H204), V205 (= V205), F206 (≠ W206), R213 (= R213), D248 (≠ L248), R271 (= R271)
6wj9B Udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-glcnac (see paper)
31% identity, 89% coverage: 5:281/312 of query aligns to 3:281/308 of 6wj9B
- active site: A119 (≠ S121), A120 (≠ G123), A121 (= A124), F144 (≠ Y146), K148 (= K150)
- binding nicotinamide-adenine-dinucleotide: G8 (= G10), G11 (= G13), F12 (= F14), I13 (≠ L15), D32 (vs. gap), D33 (vs. gap), S35 (= S34), T36 (≠ R35), G37 (≠ D36), D55 (= D57), A56 (≠ F58), L75 (= L77), A76 (≠ V78), A77 (≠ S79), S94 (≠ E96), A117 (= A119), A119 (≠ S121), F144 (≠ Y146), K148 (= K150), F171 (≠ I173), F172 (≠ S174), I174 (≠ P176)
- binding uridine-diphosphate-n-acetylglucosamine: V81 (≠ P83), N173 (= N175), G187 (= G188), V188 (= V189), F192 (= F193), T203 (≠ H204), L204 (≠ V205), F205 (≠ W206), R212 (= R213), L248 (= L248), R271 (= R271), D274 (= D274)
6wjaA Udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-galnac (see paper)
31% identity, 89% coverage: 5:281/312 of query aligns to 2:280/307 of 6wjaA
- active site: A118 (≠ S121), A119 (≠ G123), A120 (= A124), F143 (≠ Y146), K147 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (vs. gap), D32 (vs. gap), S34 (= S34), T35 (≠ R35), G36 (≠ D36), A55 (≠ F58), L74 (= L77), A75 (≠ V78), A76 (≠ S79), S93 (≠ E96), F143 (≠ Y146), K147 (= K150), F170 (≠ I173), F171 (≠ S174), I173 (≠ P176)
- binding uridine-diphosphate-n-acetylgalactosamine: V80 (≠ P83), A120 (= A124), N172 (= N175), G186 (= G188), V187 (= V189), F191 (= F193), T202 (≠ H204), F204 (≠ W206), R211 (= R213), L247 (= L248), R270 (= R271), D273 (= D274)
1sb9A Crystal structure of pseudomonas aeruginosa udp-n-acetylglucosamine 4- epimerase complexed with udp-glucose (see paper)
30% identity, 96% coverage: 8:307/312 of query aligns to 20:334/340 of 1sb9A
- active site: S141 (= S121), S142 (≠ G123), S143 (≠ A124), Y165 (= Y146), K169 (= K150), N203 (≠ T183)
- binding nicotinamide-adenine-dinucleotide: G22 (= G10), G25 (= G13), F26 (= F14), I27 (≠ L15), D46 (≠ H31), N47 (≠ A32), F48 (= F33), T50 (≠ R35), G51 (≠ D36), D77 (= D57), I78 (≠ F58), Q97 (≠ L77), A99 (≠ S79), T116 (≠ E96), A139 (= A119), A140 (≠ S120), Y165 (= Y146), K169 (= K150), Y192 (≠ I173), N194 (= N175), V195 (≠ P176)
- binding uridine-5'-diphosphate-glucose: S141 (= S121), Y165 (= Y146), N194 (= N175), A208 (≠ G188), V209 (= V189), W213 (≠ F193), Y224 (≠ H204), I225 (≠ V205), N226 (≠ W206), L270 (= L248), R298 (= R271), D301 (= D274)
1sb8A Crystal structure of pseudomonas aeruginosa udp-n-acetylglucosamine 4- epimerase complexed with udp-n-acetylgalactosamine (see paper)
30% identity, 96% coverage: 8:307/312 of query aligns to 21:335/341 of 1sb8A
- active site: S142 (= S121), S143 (≠ G123), S144 (≠ A124), Y166 (= Y146), K170 (= K150), N204 (≠ T183)
- binding nicotinamide-adenine-dinucleotide: G23 (= G10), G26 (= G13), F27 (= F14), I28 (≠ L15), D47 (≠ H31), N48 (≠ A32), F49 (= F33), T51 (≠ R35), G52 (≠ D36), D78 (= D57), I79 (≠ F58), Q98 (≠ L77), A100 (≠ S79), T117 (≠ E96), A140 (= A119), A141 (≠ S120), Y166 (= Y146), K170 (= K150), Y193 (≠ I173), N195 (= N175), V196 (≠ P176)
- binding uridine-diphosphate-n-acetylgalactosamine: S103 (≠ T81), S142 (= S121), S143 (≠ G123), S144 (≠ A124), Y166 (= Y146), N195 (= N175), A209 (≠ G188), V210 (= V189), W214 (≠ F193), Y225 (≠ H204), I226 (≠ V205), N227 (≠ W206), R234 (= R213), L271 (= L248), R299 (= R271), D302 (= D274), S306 (= S278)
6kvcA Moee5 in complex with udp-glucose and NAD (see paper)
33% identity, 96% coverage: 8:307/312 of query aligns to 5:293/299 of 6kvcA
- active site: S109 (= S121), S110 (≠ G122), S111 (≠ G123), Y132 (= Y146), K136 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), R32 (= R35), R33 (≠ N40), D46 (= D57), L47 (≠ F58), L65 (= L77), A66 (≠ V78), A67 (≠ S79), P69 (≠ T81), A107 (= A119), S109 (= S121), K136 (= K150), F161 (≠ I173), T163 (≠ N175), V164 (≠ P176), R170 (= R182), M173 (≠ A185)
- binding uridine-5'-diphosphate-glucose: P69 (≠ T81), R72 (≠ K84), S109 (= S121), S110 (≠ G122), Y132 (= Y146), T163 (≠ N175), M173 (≠ A185), F174 (≠ V189), R177 (≠ V192), E189 (≠ H204), I190 (≠ V205), Y191 (≠ W206), Q196 (≠ V211), R198 (= R213), D260 (= D274)
6pmhA Structure of epimerase mth375 from the thermophilic pseudomurein- containing methanogen methanothermobacter thermautotrophicus
29% identity, 100% coverage: 1:311/312 of query aligns to 1:320/330 of 6pmhA
- active site: S127 (= S121), C129 (≠ G123), G130 (≠ A124), Y153 (= Y146), K157 (= K150)
- binding adenosine monophosphate: G16 (= G10), G19 (= G13), D40 (≠ S34), N41 (≠ R35), S43 (= S37), S44 (≠ R38), S45 (≠ R39), D62 (= D57), I63 (≠ F58), A84 (≠ V78), F87 (≠ T81), R194 (≠ Q187)
- binding uridine-5'-diphosphate: C129 (≠ G123), N182 (= N175), N195 (≠ G188), V196 (= V189), F200 (= F193), P211 (≠ H204), I212 (≠ V205), T213 (≠ W206), R220 (= R213), V256 (≠ L248), R279 (= R271)
6pnlA Structure of epimerase mth375 from the thermophilic pseudomurein- containing methanogen methanothermobacter thermautotrophicus
29% identity, 100% coverage: 1:311/312 of query aligns to 7:326/336 of 6pnlA
- active site: S133 (= S121), C135 (≠ G123), G136 (≠ A124), Y159 (= Y146), K163 (= K150)
- binding nicotinamide-adenine-dinucleotide: G22 (= G10), G25 (= G13), C26 (≠ F14), D46 (≠ S34), N47 (≠ R35), L48 (≠ D36), S49 (= S37), S50 (≠ R38), S51 (≠ R39), D68 (= D57), I69 (≠ F58), L89 (= L77), A91 (≠ S79), F93 (≠ T81), V108 (≠ E96), S131 (≠ A119), S133 (= S121), Y159 (= Y146), K163 (= K150), F186 (≠ I173), N188 (= N175), V189 (≠ P176), R200 (≠ Q187)
- binding uridine-5'-diphosphate: N188 (= N175), N201 (≠ G188), V202 (= V189), F206 (= F193), P217 (≠ H204), I218 (≠ V205), T219 (≠ W206), R226 (= R213), V262 (≠ L248), R285 (= R271)
6kv9A Moee5 in complex with udp-glucuronic acid and NAD (see paper)
33% identity, 96% coverage: 8:307/312 of query aligns to 5:294/299 of 6kv9A
- active site: S110 (= S121), S111 (≠ G122), S112 (≠ G123), Y133 (= Y146), K137 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (≠ S34), R32 (= R35), R33 (≠ N40), D47 (= D57), L48 (≠ F58), L66 (= L77), A67 (≠ V78), A68 (≠ S79), P70 (≠ T81), C85 (≠ E96), A108 (= A119), S109 (= S120), K137 (= K150), F162 (≠ I173), T164 (≠ N175), V165 (≠ P176), R171 (= R182), M174 (≠ A185)
- binding uridine-5'-diphosphate-glucuronic acid: P70 (≠ T81), R73 (≠ K84), S110 (= S121), S111 (≠ G122), Y133 (= Y146), T164 (≠ N175), R171 (= R182), M174 (≠ A185), F175 (≠ V189), R178 (≠ V192), E190 (≠ H204), I191 (≠ V205), Y192 (≠ W206), Q197 (≠ V211), R199 (= R213), V235 (≠ L248), D261 (= D274)
6zllA Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp-galacturonic acid and NAD (see paper)
27% identity, 98% coverage: 4:310/312 of query aligns to 1:312/321 of 6zllA
- active site: T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), Y149 (= Y146), K153 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D32 (= D36), H33 (≠ S37), F34 (≠ R38), I35 (≠ R39), K43 (vs. gap), D62 (= D57), I63 (≠ F58), L81 (= L77), A82 (≠ V78), A83 (≠ S79), I124 (≠ A119), T126 (≠ S121), Y149 (= Y146), K153 (= K150), Y176 (≠ I173), V179 (≠ P176), R185 (= R182), M188 (≠ A185)
- binding (2S,3R,4S,5R,6R)-6-[[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4,5-trihydroxy-oxane-2-carboxylic acid: P85 (≠ T81), V87 (≠ P83), R88 (≠ K84), T126 (≠ S121), S127 (≠ G122), Y149 (= Y146), T178 (≠ N175), R185 (= R182), A189 (≠ V189), R192 (≠ V192), T204 (≠ H204), F206 (≠ W206), Q211 (≠ V211), R213 (= R213), I250 (≠ L248), E276 (≠ D274)
6zldA Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp-glucuronic acid and NAD (see paper)
27% identity, 98% coverage: 4:310/312 of query aligns to 1:312/314 of 6zldA
- active site: T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), Y149 (= Y146), K153 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D32 (= D36), H33 (≠ S37), F34 (≠ R38), I35 (≠ R39), K43 (vs. gap), D62 (= D57), I63 (≠ F58), L81 (= L77), A82 (≠ V78), A83 (≠ S79), I124 (≠ A119), T126 (≠ S121), K153 (= K150), Y176 (≠ I173), T178 (≠ N175), R185 (= R182), M188 (≠ A185)
- binding uridine-5'-diphosphate-glucuronic acid: P85 (≠ T81), R88 (≠ K84), T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), Y149 (= Y146), F177 (≠ S174), T178 (≠ N175), R185 (= R182), M188 (≠ A185), A189 (≠ V189), R192 (≠ V192), T204 (≠ H204), F206 (≠ W206), Q211 (≠ V211), R213 (= R213), I250 (≠ L248), E276 (≠ D274)
6zl6A Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp and NAD (see paper)
27% identity, 98% coverage: 4:310/312 of query aligns to 1:312/314 of 6zl6A
- active site: T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), Y149 (= Y146), K153 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D32 (= D36), H33 (≠ S37), F34 (≠ R38), I35 (≠ R39), K43 (vs. gap), D62 (= D57), I63 (≠ F58), L81 (= L77), A82 (≠ V78), A83 (≠ S79), I124 (≠ A119), T126 (≠ S121), K153 (= K150), Y176 (≠ I173), T178 (≠ N175), V179 (≠ P176), R185 (= R182), M188 (≠ A185)
- binding uridine-5'-diphosphate: T178 (≠ N175), A189 (≠ V189), R192 (≠ V192), T204 (≠ H204), F206 (≠ W206), Q211 (≠ V211), R213 (= R213), I250 (≠ L248), E276 (≠ D274)
6bwlA X-ray structure of pal from bacillus thuringiensis (see paper)
28% identity, 85% coverage: 4:267/312 of query aligns to 1:266/313 of 6bwlA
- active site: T122 (≠ S120), C123 (≠ S121), M124 (≠ A124), Y147 (= Y146), K151 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D31 (vs. gap), N32 (vs. gap), L33 (vs. gap), N35 (≠ F33), S36 (= S34), D57 (= D57), I58 (≠ F58), L79 (= L77), A80 (≠ V78), A81 (≠ S79), I83 (≠ T81), M120 (≠ Y118), K151 (= K150), N176 (= N175), T177 (≠ P176)
- binding uridine-5'-diphosphate: N176 (= N175), G189 (= G188), V190 (= V189), N205 (≠ H204), I206 (≠ V205), Y207 (≠ W206), Q212 (≠ V211), R214 (= R213), I250 (≠ L248)
Sites not aligning to the query:
2c20A Crystal structure of udp-glucose 4-epimerase
26% identity, 96% coverage: 8:307/312 of query aligns to 5:319/329 of 2c20A
- active site: T117 (≠ S121), A118 (≠ G122), A119 (= A124), Y141 (= Y146), K145 (= K150), H184 (vs. gap)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), Y11 (≠ F14), I12 (≠ L15), D31 (≠ S34), N32 (≠ R35), Q34 (≠ S37), T35 (≠ R38), G36 (≠ R39), D51 (= D57), L52 (≠ F58), F73 (≠ L77), A74 (≠ V78), A75 (≠ S79), N92 (≠ E96), Y141 (= Y146), K145 (= K150), Y168 (≠ I173), F169 (≠ S174), V171 (≠ P176), H184 (vs. gap)
- binding zinc ion: E182 (vs. gap), H184 (vs. gap), E187 (vs. gap), H189 (vs. gap)
6zljA Crystal structure of udp-glucuronic acid 4-epimerase y149f mutant from bacillus cereus in complex with udp-4-deoxy-4-fluoro-glucuronic acid and NAD (see paper)
27% identity, 98% coverage: 4:310/312 of query aligns to 1:312/314 of 6zljA
- active site: T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), F149 (≠ Y146), K153 (= K150)
- binding nicotinamide-adenine-dinucleotide: G7 (= G10), G10 (= G13), F11 (= F14), I12 (≠ L15), D32 (= D36), H33 (≠ S37), F34 (≠ R38), I35 (≠ R39), K43 (vs. gap), D62 (= D57), I63 (≠ F58), L81 (= L77), A82 (≠ V78), A83 (≠ S79), I124 (≠ A119), T126 (≠ S121), K153 (= K150), Y176 (≠ I173), T178 (≠ N175), V179 (≠ P176), R185 (= R182), M188 (≠ A185)
- binding (2~{R},3~{S},4~{R},5~{R},6~{R})-6-[[[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3-fluoranyl-4,5-bis(oxidanyl)oxane-2-carboxylic acid: P85 (≠ T81), R88 (≠ K84), T126 (≠ S121), S127 (≠ G122), S128 (≠ A124), F149 (≠ Y146), F177 (≠ S174), T178 (≠ N175), R185 (= R182), M188 (≠ A185), A189 (≠ V189), R192 (≠ V192), T204 (≠ H204), F206 (≠ W206), Q211 (≠ V211), R213 (= R213), I250 (≠ L248), E276 (≠ D274)
Query Sequence
>209495 MicrobesOnline__882:209495
MSSFRACVLGASGFLGSHLVHHLLKAGCQVHAFSRDSRRNPLLTDELMSSCSIFTGDFFN
TQDVERALADCDVCFHLVSTTIPKTSNDDPLRDVRENLSGSLTLLECVRRTGVRKVVYAS
SGGAIYGKHLMPRISENHPTDPLCSYGIVKLAVEKYLALYHELYGIDYAALRISNPFGPL
QRTSAEQGVIGVFLGKILRNEPLHVWGDGSVVRDYIYVEDVARALVLAARLNTEHHVFNI
GSGAGLSLNDIIDMMRSVTGRDVVVKYDQNRVFDVPYSVLDVSLAERELGWRALFPFKVG
VSLAWVWLCENS
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory